FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3289-RA through 18771 annotations produced 1 hits

Phosphotyrosyl phosphatase activator (Ptpa):

Annotation Number : CG3289
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0016698
Gbrowse : chr2L:3377007-3378586 (+) // 100.0 //
Probeset : 1629241_at
Accessions : protein= NP_523466;, nucleotide= NM_078742;
Interpro : 0005524 // ATP binding // inferred from sequence or structural similarity /// 0008160 // protein tyrosine phosphatase ac
FlyMine data for FBgn0016698.
BDGP gene expression has embryonic in situ data for Ptpa: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0016698 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	196 ± 4	4 of 4	2.00	Up
Head	110 ± 2	4 of 4	1.10	None
Eye	104 ± 3	4 of 4	1.04	None
Thoracicoabdominal ganglion	216 ± 6	4 of 4	2.20	Up
Salivary gland	150 ± 13	4 of 4	1.51	Up
Crop	152 ± 5	4 of 4	1.50	Up
Midgut	53 ± 1	4 of 4	0.50	Down
Tubule	72 ± 3	4 of 4	0.70	Down
Hindgut	142 ± 6	4 of 4	1.40	Up
Heart	87 ± 5	4 of 4	0.88	None
Fat body	73 ± 10	4 of 4	0.74	Down
Ovary	167 ± 4	4 of 4	1.70	Up
Testis	89 ± 2	4 of 4	0.90	None
Male accessory glands	56 ± 4	4 of 4	0.60	Down
Virgin spermatheca	60 ± 4	4 of 4	0.61	Down
Mated spermatheca	62 ± 3	4 of 4	0.62	Down
Adult carcass	120 ± 2	4 of 4	1.20	None
Larval CNS	160 ± 14	4 of 4	1.61	Up
Larval Salivary gland	90 ± 5	4 of 4	0.90	None
Larval midgut	54 ± 2	4 of 4	0.54	Down
Larval tubule	90 ± 3	4 of 4	0.90	None
Larval hindgut	99 ± 8	4 of 4	1.00	None
Larval fat body	112 ± 4	4 of 4	1.10	None
Larval trachea	126 ± 19	4 of 4	1.26	None
Larval carcass	68 ± 3	4 of 4	0.68	Down
S2 cells (growing)	135 ± 2	4 of 4	1.36	Up
Whole fly	99 ± 7	4 of 4

Looking for CG3289-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720