FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3299-RA through 18771 annotations produced 1 hits

vinculin (Vinc):

Annotation Number : CG3299
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004397
Gbrowse : chrX:2108318-2116492 (-) // 100.0 //
Probeset : 1631535_at
Accessions : protein= NP_476820;, nucleotide= NM_057472;
Pathway : engulfment // inferred from mutant phenotype /// 0007016 // cytoskeletal anchoring at plasma membrane // inferred from
Interpro : 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic anno
FlyMine data for FBgn0004397.
BDGP gene expression has embryonic in situ data for Vinc: 12 pix of staining in 6 body parts.
Homophila reports that CG3299 is a close match (2e-96) to human gene VCL;CMD1W (NP_054706), a gene associated with Cardiomyopathy, dilated, 1W, 611407 (3).
BioGrid reports that CG3299 interacts with CG3497 CG4095 CG8547 .
TRiP has 1 RNAi stocks for FBgn0004397 available for purchase.
VDRC has 3 RNAi stocks for FBgn0004397 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	114 ± 5	4 of 4	0.50	Down
Head	412 ± 14	4 of 4	1.60	Up
Eye	728 ± 31	4 of 4	2.88	Up
Thoracicoabdominal ganglion	171 ± 4	4 of 4	0.70	Down
Salivary gland	624 ± 29	4 of 4	2.47	Up
Crop	840 ± 21	4 of 4	3.30	Up
Midgut	306 ± 7	4 of 4	1.20	Up
Tubule	206 ± 8	4 of 4	0.80	Down
Hindgut	541 ± 11	4 of 4	2.10	Up
Heart	247 ± 20	4 of 4	0.98	None
Fat body	233 ± 21	4 of 4	0.92	None
Ovary	303 ± 4	4 of 4	1.20	Up
Testis	81 ± 3	4 of 4	0.30	Down
Male accessory glands	272 ± 6	4 of 4	1.10	None
Virgin spermatheca	196 ± 14	4 of 4	0.78	Down
Mated spermatheca	233 ± 11	4 of 4	0.92	None
Adult carcass	352 ± 19	4 of 4	1.40	Up
Larval CNS	175 ± 13	4 of 4	0.69	Down
Larval Salivary gland	1184 ± 31	4 of 4	4.68	Up
Larval midgut	601 ± 10	4 of 4	2.38	Up
Larval tubule	335 ± 8	4 of 4	1.30	Up
Larval hindgut	1037 ± 28	4 of 4	4.10	Up
Larval fat body	202 ± 21	4 of 4	0.80	None
Larval trachea	479 ± 40	4 of 4	1.89	Up
Larval carcass	1024 ± 67	4 of 4	4.05	Up
S2 cells (growing)	1112 ± 34	4 of 4	4.40	Up
Whole fly	253 ± 12	4 of 4

Looking for CG3299-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720