Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG33085-RA through 18771 annotations produced 1 hits



/// (CG9510 /// CG9515):

Annotation Number : CG33085
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032076 /// FBgn0032077
Gbrowse : chr2L:8939779-8943264 (-) // 100.0 //
Probeset : 1640488_a_at
Accessions : protein= NP_001027233; /// NP_001027234; /// NP_609257;, nucleotide= NM_001032062; /// NM_001032063; /// NM_135413;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004056 // argininosuccinate lyase activity //
FlyMine data for FBgn0032076 /// FBgn0032077.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain37 ± 14 of 4 0.10Down
Head680 ± 754 of 4 2.30Up
Eye225 ± 464 of 4 0.78None
Thoracicoabdominal ganglion40 ± 64 of 4 0.10Down
Salivary gland13 ± 30 of 4 0.05Down
Crop23 ± 34 of 4 0.10Down
Midgut642 ± 164 of 4 2.20Up
Tubule399 ± 374 of 4 1.40Up
Hindgut238 ± 114 of 4 0.80Down
Heart1466 ± 934 of 4 5.06Up
Fat body2444 ± 1314 of 4 8.43Up
Ovary10 ± 04 of 4 0.00Down
Testis141 ± 74 of 4 0.50Down
Male accessory glands11 ± 04 of 4 0.00Down
Virgin spermatheca3608 ± 1494 of 412.44Up
Mated spermatheca2257 ± 3054 of 4 7.79Up
Adult carcass1513 ± 1074 of 4 5.20Up
Larval CNS13 ± 14 of 4 0.05Down
Larval Salivary gland50 ± 24 of 4 0.17Down
Larval midgut781 ± 384 of 4 2.69Up
Larval tubule520 ± 294 of 4 1.80Up
Larval hindgut344 ± 284 of 4 1.19None
Larval fat body2868 ± 2874 of 4 9.90Up
Larval trachea30 ± 214 of 4 0.11Down
Larval carcass26 ± 43 of 4 0.09Down
S2 cells (growing)42 ± 24 of 4 0.15Down
Whole fly290 ± 114 of 4

Looking for CG33085-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime