FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG33087-RC through 18771 annotations produced 3 hits

LDLR-like (LRP1):

Annotation Number : CG33087
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053087
Gbrowse : chr2R:4094022-4113243 (+) // 100.0 //
Probeset : 1624650_at
Accessions : protein= NP_788284;, nucleotide= NM_176104;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : "0005041 // low-density lipoprotein receptor activity // inferred from sequence or structural similarity /// 0005509 //
FlyMine data for FBgn0053087.
Homophila reports that CG33087 is a close match (4e-11) to human gene DHRD;EFEMP1;FBNL (NP_004096), a gene associated with Doyne honeycomb degeneration of retina, 126600 (3).
TRiP has 1 RNAi stocks for FBgn0053087 available for purchase.
VDRC has 6 RNAi stocks for FBgn0053087 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	91 ± 1	4 of 4	2.80	Up
Head	67 ± 8	4 of 4	2.00	Up
Eye	62 ± 4	4 of 4	1.88	Up
Thoracicoabdominal ganglion	74 ± 5	4 of 4	2.30	Up
Salivary gland	8 ± 5	0 of 4	0.25	Down
Crop	53 ± 2	4 of 4	1.60	Up
Midgut	10 ± 4	1 of 4	0.30	Down
Tubule	11 ± 0	2 of 4	0.30	Down
Hindgut	16 ± 2	4 of 4	0.50	Down
Heart	59 ± 4	4 of 4	1.80	Up
Fat body	104 ± 14	4 of 4	3.17	Up
Ovary	57 ± 3	4 of 4	1.80	Up
Testis	8 ± 0	2 of 4	0.20	Down
Male accessory glands	11 ± 1	0 of 4	0.30	Down
Virgin spermatheca	37 ± 5	4 of 4	1.14	None
Mated spermatheca	20 ± 3	4 of 4	0.63	Down
Adult carcass	78 ± 11	4 of 4	2.40	Up
Larval CNS	139 ± 5	4 of 4	4.22	Up
Larval Salivary gland	7 ± 2	0 of 4	0.22	Down
Larval midgut	3 ± 1	0 of 4	0.11	Down
Larval tubule	67 ± 7	4 of 4	2.10	Up
Larval hindgut	15 ± 1	3 of 4	0.47	Down
Larval fat body	206 ± 26	4 of 4	6.30	Up
Larval trachea	34 ± 5	4 of 4	1.04	None
Larval carcass	41 ± 9	4 of 4	1.26	None
S2 cells (growing)	202 ± 12	4 of 4	6.16	Up
Whole fly	33 ± 2	4 of 4

LDLR-like (LRP1):

Annotation Number : CG33087
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053087
Gbrowse : chr2R:4094022-4094328 (+) // 100.0 //
Probeset : 1626279_at
Accessions : protein= NP_788284;, nucleotide= NM_176104;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : "0005041 // low-density lipoprotein receptor activity // inferred from sequence or structural similarity /// 0005509 //
FlyMine data for FBgn0053087.
Homophila reports that CG33087 is a close match (4e-11) to human gene DHRD;EFEMP1;FBNL (NP_004096), a gene associated with Doyne honeycomb degeneration of retina, 126600 (3).
TRiP has 1 RNAi stocks for FBgn0053087 available for purchase.
VDRC has 6 RNAi stocks for FBgn0053087 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 0	0 of 4	0.40	None
Head	4 ± 1	0 of 4	0.60	None
Eye	1 ± 0	0 of 4	0.19	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	0.60	None
Salivary gland	6 ± 1	0 of 4	0.81	None
Crop	5 ± 2	0 of 4	0.70	None
Midgut	46 ± 9	2 of 4	5.80	Up
Tubule	6 ± 0	0 of 4	0.80	None
Hindgut	3 ± 1	0 of 4	0.50	None
Heart	1 ± 0	0 of 4	0.23	None
Fat body	8 ± 6	0 of 4	1.07	None
Ovary	3 ± 1	0 of 4	0.40	None
Testis	2 ± 0	0 of 4	0.30	None
Male accessory glands	6 ± 1	0 of 4	0.80	None
Virgin spermatheca	6 ± 1	0 of 4	0.85	None
Mated spermatheca	8 ± 0	0 of 4	1.01	None
Adult carcass	4 ± 1	0 of 4	0.60	None
Larval CNS	5 ± 2	0 of 4	0.64	None
Larval Salivary gland	6 ± 1	0 of 4	0.82	None
Larval midgut	68 ± 11	1 of 4	8.59	Up
Larval tubule	2 ± 0	0 of 4	0.30	None
Larval hindgut	3 ± 1	0 of 4	0.40	None
Larval fat body	6 ± 1	0 of 4	0.70	None
Larval trachea	1 ± 0	0 of 4	0.16	None
Larval carcass	5 ± 1	0 of 4	0.74	None
S2 cells (growing)	4 ± 1	0 of 4	0.60	None
Whole fly	8 ± 3	0 of 4

LDLR-like (LRP1):

Annotation Number : CG33087
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053087
Gbrowse : chr2R:4094022-4094328 (+) // 100.0 //
Probeset : 1627085_a_at
Accessions : protein= NP_788284;, nucleotide= NM_176104;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : "0005041 // low-density lipoprotein receptor activity // inferred from sequence or structural similarity /// 0005509 //
FlyMine data for FBgn0053087.
Homophila reports that CG33087 is a close match (4e-11) to human gene DHRD;EFEMP1;FBNL (NP_004096), a gene associated with Doyne honeycomb degeneration of retina, 126600 (3).
TRiP has 1 RNAi stocks for FBgn0053087 available for purchase.
VDRC has 6 RNAi stocks for FBgn0053087 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	1.30	None
Head	1 ± 0	0 of 4	0.50	None
Eye	2 ± 1	0 of 4	0.64	None
Thoracicoabdominal ganglion	3 ± 1	0 of 4	1.00	None
Salivary gland	4 ± 2	0 of 4	1.35	None
Crop	1 ± 0	0 of 4	0.50	None
Midgut	4 ± 1	0 of 4	1.30	None
Tubule	6 ± 0	0 of 4	1.80	Up
Hindgut	4 ± 1	0 of 4	1.40	None
Heart	2 ± 1	0 of 4	0.82	None
Fat body	5 ± 4	0 of 4	1.58	None
Ovary	2 ± 1	0 of 4	0.60	None
Testis	2 ± 0	0 of 4	0.60	None
Male accessory glands	9 ± 3	0 of 4	2.70	None
Virgin spermatheca	5 ± 1	0 of 4	1.45	None
Mated spermatheca	7 ± 1	0 of 4	2.11	None
Adult carcass	1 ± 0	0 of 4	0.40	None
Larval CNS	2 ± 1	0 of 4	0.64	None
Larval Salivary gland	6 ± 1	0 of 4	1.96	None
Larval midgut	2 ± 0	0 of 4	0.61	None
Larval tubule	7 ± 2	0 of 4	2.20	None
Larval hindgut	1 ± 0	0 of 4	0.36	None
Larval fat body	14 ± 3	0 of 4	4.40	Up
Larval trachea	1 ± 0	0 of 4	0.34	None
Larval carcass	4 ± 1	0 of 4	1.17	None
S2 cells (growing)	2 ± 0	0 of 4	0.59	None
Whole fly	3 ± 1	0 of 4

Looking for CG33087-RC. 3 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720