Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
About & FAQ
Top 50
Original data
Interesting meta-analysis

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for CG33119-RA through 18771 annotations produced 1 hits

CG33119 (nimB1):

Annotation Number : CG33119
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027929
Gbrowse : chr2L:13963545-13965088 (+) // 100.0 //
Probeset : 1628174_at
Accessions : protein= NP_788045;, nucleotide= NM_176031;
FlyMine data for FBgn0027929.
BDGP gene expression has embryonic in situ data for BG:DS00180.12: 11 pix of staining in 2 body parts.
VDRC has 2 RNAi stocks for FBgn0027929 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 22 of 4 0.80None
Head43 24 of 4 4.90Up
Eye20 54 of 4 2.27None
Thoracicoabdominal ganglion2 10 of 4 0.30None
Salivary gland3 00 of 4 0.40None
Crop1 00 of 4 0.20None
Midgut1 00 of 4 0.20None
Tubule3 00 of 4 0.40Down
Hindgut1 00 of 4 0.20None
Heart111 54 of 412.39Up
Fat body71 114 of 4 7.97Up
Ovary0 00 of 4 0.10None
Testis3 10 of 4 0.30None
Male accessory glands1 00 of 4 0.20None
Virgin spermatheca63 54 of 4 7.02Up
Mated spermatheca59 34 of 4 6.59Up
Adult carcass44 44 of 4 4.90Up
Larval CNS1 10 of 4 0.11None
Larval Salivary gland1 00 of 4 0.16None
Larval midgut1 00 of 4 0.18None
Larval tubule12 11 of 4 1.30None
Larval hindgut3 10 of 4 0.35None
Larval fat body21 52 of 4 2.40None
Larval trachea16 32 of 4 1.87None
Larval carcass28 13 of 4 3.14Up
S2 cells (growing)3 10 of 4 0.33None
Whole fly9 30 of 4

Looking for CG33119-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime