Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG33131-RA through 18771 annotations produced 1 hits



SCAP (SCAP):

Annotation Number : CG33131
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033052
Gbrowse : chr2R:1913777-1923011 (-) // 100.0 //
Probeset : 1623782_at
Accessions : protein= NP_788277;, nucleotide= NM_176097;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation
FlyMine data for FBgn0033052.
Homophila reports that CG33131 is a close match (6e-11) to human gene NPC;NPC1 (NP_000262), a gene associated with Niemann-Pick disease, type C1, 257220 (3);Niemann-Pick disease, type D, 257220 (3).
TRiP has 1 RNAi stocks for FBgn0033052 available for purchase.
VDRC has 2 RNAi stocks for FBgn0033052 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain346 ± 74 of 4 2.30Up
Head252 ± 24 of 4 1.70Up
Eye370 ± 154 of 4 2.51Up
Thoracicoabdominal ganglion343 ± 84 of 4 2.30Up
Salivary gland262 ± 54 of 4 1.78Up
Crop335 ± 84 of 4 2.30Up
Midgut108 ± 34 of 4 0.70Down
Tubule191 ± 74 of 4 1.30Up
Hindgut245 ± 54 of 4 1.70Up
Heart341 ± 194 of 4 2.32Up
Fat body342 ± 334 of 4 2.32Up
Ovary237 ± 64 of 4 1.60Up
Testis34 ± 24 of 4 0.20Down
Male accessory glands227 ± 184 of 4 1.50Up
Virgin spermatheca275 ± 194 of 4 1.87Up
Mated spermatheca272 ± 24 of 4 1.85Up
Adult carcass249 ± 94 of 4 1.70Up
Larval CNS231 ± 174 of 4 1.57Up
Larval Salivary gland189 ± 94 of 4 1.28Up
Larval midgut159 ± 24 of 4 1.08None
Larval tubule108 ± 44 of 4 0.70Down
Larval hindgut178 ± 84 of 4 1.21Up
Larval fat body168 ± 114 of 4 1.10None
Larval trachea235 ± 34 of 4 1.59Up
Larval carcass177 ± 94 of 4 1.20None
S2 cells (growing)496 ± 64 of 4 3.36Up
Whole fly147 ± 74 of 4

Looking for CG33131-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime