FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG33145-RA through 18771 annotations produced 1 hits

(CG33145):

Annotation Number : CG33145
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053145
Gbrowse : chr2R:7868085-7870457 (-) // 100.0 //
Probeset : 1630824_a_at
Accessions : protein= NP_788328; /// NP_788329;, nucleotide= NM_176148; /// NM_176149;
Pathway : 0005794 // Golgi apparatus // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : "0008378 // galactosyltransferase activity // inferred from electronic annotation /// 0008499 // UDP-galactose:beta-N-ac
FlyMine data for FBgn0053145.
BDGP gene expression has embryonic in situ data for CG33145: 6 pix of staining in 1 body parts.
Homophila reports that CG33145 is a close match (3e-19) to human gene B3GALT3;GLCT3;P (NP_149359), a gene associated with [Blood group, P system], 111400 (3);{Urinary tract infection, susceptibility to} (1).
VDRC has 2 RNAi stocks for FBgn0053145 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	283 ± 9	4 of 4	1.80	Up
Head	101 ± 7	4 of 4	0.60	Down
Eye	84 ± 5	4 of 4	0.54	Down
Thoracicoabdominal ganglion	321 ± 9	4 of 4	2.00	Up
Salivary gland	79 ± 5	4 of 4	0.50	Down
Crop	69 ± 5	4 of 4	0.40	Down
Midgut	41 ± 1	4 of 4	0.30	Down
Tubule	41 ± 2	4 of 4	0.30	Down
Hindgut	71 ± 5	4 of 4	0.50	Down
Heart	94 ± 8	4 of 4	0.60	Down
Fat body	72 ± 6	4 of 4	0.46	Down
Ovary	332 ± 5	4 of 4	2.10	Up
Testis	44 ± 4	4 of 4	0.30	Down
Male accessory glands	35 ± 2	4 of 4	0.20	Down
Virgin spermatheca	55 ± 3	4 of 4	0.35	Down
Mated spermatheca	83 ± 5	4 of 4	0.53	Down
Adult carcass	60 ± 1	4 of 4	0.40	Down
Larval CNS	237 ± 9	4 of 4	1.51	Up
Larval Salivary gland	84 ± 4	4 of 4	0.54	Down
Larval midgut	89 ± 7	4 of 4	0.57	Down
Larval tubule	44 ± 5	4 of 4	0.30	Down
Larval hindgut	139 ± 4	4 of 4	0.89	None
Larval fat body	65 ± 1	4 of 4	0.40	Down
Larval trachea	95 ± 5	4 of 4	0.61	Down
Larval carcass	125 ± 10	4 of 4	0.80	None
S2 cells (growing)	287 ± 5	4 of 4	1.83	Up
Whole fly	157 ± 9	4 of 4

Looking for CG33145-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720