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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG33151-RA through 18771 annotations produced 1 hits



Gustatory receptor 59e (Gr59e):

Annotation Number : CG33151
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041233
Gbrowse : chr2R:19428576-19429902 (-) // 100.0 //
Probeset : 1623450_at
Accessions : protein= NP_788431;, nucleotide= NM_176251;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0041233.
TRiP has 1 RNAi stocks for FBgn0041233 available for purchase.
VDRC has 3 RNAi stocks for FBgn0041233 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 10 of 4 1.10None
Head5 10 of 4 1.30None
Eye0 00 of 4 0.24Down
Thoracicoabdominal ganglion7 10 of 4 1.90None
Salivary gland8 40 of 4 2.01None
Crop4 20 of 4 1.20None
Midgut3 10 of 4 0.80None
Tubule6 10 of 4 1.60Up
Hindgut6 20 of 4 1.50None
Heart2 00 of 4 0.73None
Fat body11 23 of 4 2.94Up
Ovary7 01 of 4 1.80Up
Testis5 10 of 4 1.40None
Male accessory glands10 30 of 4 2.50None
Virgin spermatheca6 11 of 4 1.73None
Mated spermatheca5 10 of 4 1.24None
Adult carcass11 30 of 4 3.00None
Larval CNS5 01 of 4 1.44None
Larval Salivary gland9 10 of 4 2.40Up
Larval midgut14 31 of 4 3.55None
Larval tubule10 01 of 4 2.70Up
Larval hindgut8 11 of 4 2.17None
Larval fat body14 10 of 4 3.60Up
Larval trachea2 10 of 4 0.64None
Larval carcass8 10 of 4 2.17Up
S2 cells (growing)7 11 of 4 1.84None
Whole fly4 01 of 4

Looking for CG33151-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime