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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG33157-RA through 18771 annotations produced 1 hits



Gustatory receptor 64d /// Gustatory receptor 64e (Gr64d /// Gr64e):

Annotation Number : CG33157
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035486 /// FBgn0045476
Gbrowse : chr3L:4032140-4035708 (+) // 100.0 //
Probeset : 1640888_a_at
Accessions : protein= NP_001027105; /// NP_001027106; /// NP_728922; /// NP_728923;, nucleotide= NM_001031934; /// NM_001031935; /// NM_168050; /// NM_168051;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0035486 /// FBgn0045476.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.80None
Head5 10 of 4 3.80Up
Eye0 00 of 4 0.64None
Thoracicoabdominal ganglion1 00 of 4 1.20None
Salivary gland1 00 of 4 1.28None
Crop3 10 of 4 2.40None
Midgut2 00 of 4 1.40None
Tubule3 00 of 4 2.30Up
Hindgut3 10 of 4 2.30None
Heart1 10 of 4 1.33None
Fat body1 00 of 4 1.12None
Ovary0 00 of 4 0.60None
Testis3 10 of 4 2.30None
Male accessory glands2 10 of 4 1.90None
Virgin spermatheca1 00 of 4 0.90None
Mated spermatheca1 00 of 4 1.12None
Adult carcass5 20 of 4 3.70None
Larval CNS1 10 of 4 1.09None
Larval Salivary gland6 30 of 4 4.48None
Larval midgut3 00 of 4 2.55Up
Larval tubule4 10 of 4 2.80None
Larval hindgut4 00 of 4 3.07Up
Larval fat body1 00 of 4 1.20None
Larval trachea0 00 of 4 0.57None
Larval carcass2 00 of 4 1.71None
S2 cells (growing)4 10 of 4 2.97None
Whole fly1 00 of 4

Looking for CG33157-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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