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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG33183-RC through 18771 annotations produced 1 hits



Complementation group D (Hr46):

Annotation Number : CG33183
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000448
Gbrowse : chr2R:6092940-6120896 (-) // 100.0 //
Probeset : 1623180_a_at
Accessions : protein= NP_001097256; /// NP_788301; /// NP_788302; /// NP_788303;, nucleotide= NM_001103786; /// NM_176121; /// NM_176122; /// NM_176123;
Pathway : DNA-dependent // inferred from electronic annotation /// 0007552 // metamorphosis // traceable author statement /// 001
Interpro : heterochronic // traceable author statement /// 0045449 // regulation of transcription // inferred from electronic anno
FlyMine data for FBgn0000448.
BDGP gene expression has embryonic in situ data for Hr46: 32 pix of staining in 12 body parts.
Homophila reports that CG33183 is a close match (2e-14) to human gene GCR;GRL;NR3C1 (NP_001019265), a gene associated with Cortisol resistance (3).
BioGrid reports that CG33183 interacts with CG3936 CG3839 CG30149 .
TRiP has 2 RNAi stocks for FBgn0000448 available for purchase.
VDRC has 3 RNAi stocks for FBgn0000448 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain90 ± 54 of 426.00Up
Head12 ± 34 of 4 3.60None
Eye27 ± 44 of 4 7.88Up
Thoracicoabdominal ganglion37 ± 24 of 410.80Up
Salivary gland1 ± 00 of 4 0.36Down
Crop5 ± 02 of 4 1.50None
Midgut1 ± 00 of 4 0.40None
Tubule2 ± 00 of 4 0.70Down
Hindgut2 ± 00 of 4 0.70None
Heart3 ± 10 of 4 0.89None
Fat body12 ± 23 of 4 3.43Up
Ovary1 ± 00 of 4 0.30Down
Testis0 ± 00 of 4 0.10Down
Male accessory glands3 ± 20 of 4 0.90None
Virgin spermatheca9 ± 22 of 4 2.62None
Mated spermatheca8 ± 32 of 4 2.39None
Adult carcass5 ± 20 of 4 1.60None
Larval CNS8 ± 12 of 4 2.31Up
Larval Salivary gland4 ± 10 of 4 1.20None
Larval midgut0 ± 00 of 4 0.22Down
Larval tubule13 ± 24 of 4 3.80Up
Larval hindgut2 ± 10 of 4 0.70None
Larval fat body7 ± 10 of 4 2.00None
Larval trachea2 ± 20 of 4 0.74None
Larval carcass1 ± 00 of 4 0.44None
S2 cells (growing)0 ± 00 of 4 0.09Down
Whole fly3 ± 00 of 4

Looking for CG33183-RC. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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