FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3339-RA through 18771 annotations produced 1 hits

(CG3339):

Annotation Number : CG3339
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039510
Gbrowse : chr3R:23120266-23148047 (-) // 100.0 //
Probeset : 1629817_at
Accessions : protein= NP_001036762; /// NP_651557;, nucleotide= NM_001043297; /// NM_143300;
Pathway : 0005868 // cytoplasmic dynein complex // inferred from sequence or structural similarity /// 0005875 // microtubule asso
Interpro : "0003774 // motor activity // inferred from sequence or structural similarity /// 0003777 // microtubule motor activity
FlyMine data for FBgn0039510.
Homophila reports that CG3339 is a close match (0) to human gene CILD7;DNAH11;DNAHBL;DNAHC11;KTGS3 (NP_003768), a gene associated with Ciliary dyskinesia, primary 7, 611884 (3);Kartagener syndrome, 612273 (3).
VDRC has 2 RNAi stocks for FBgn0039510 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 0	0 of 4	1.20	None
Head	9 ± 1	0 of 4	2.00	None
Eye	0 ± 0	0 of 4	0.13	Down
Thoracicoabdominal ganglion	7 ± 2	0 of 4	1.60	None
Salivary gland	18 ± 5	0 of 4	4.07	None
Crop	4 ± 2	0 of 4	1.00	None
Midgut	10 ± 2	0 of 4	2.30	None
Tubule	3 ± 1	0 of 4	0.80	None
Hindgut	6 ± 2	0 of 4	1.30	None
Heart	1 ± 1	0 of 4	0.38	None
Fat body	4 ± 2	0 of 4	0.94	None
Ovary	3 ± 1	0 of 4	0.80	None
Testis	6 ± 0	0 of 4	1.30	None
Male accessory glands	5 ± 2	0 of 4	1.30	None
Virgin spermatheca	1 ± 0	0 of 4	0.21	Down
Mated spermatheca	0 ± 0	0 of 4	0.15	Down
Adult carcass	5 ± 2	0 of 4	1.20	None
Larval CNS	1 ± 0	0 of 4	0.35	Down
Larval Salivary gland	3 ± 1	0 of 4	0.83	None
Larval midgut	8 ± 0	0 of 4	1.87	Up
Larval tubule	6 ± 4	1 of 4	1.30	None
Larval hindgut	5 ± 1	1 of 4	1.17	None
Larval fat body	2 ± 0	0 of 4	0.50	None
Larval trachea	0 ± 0	0 of 4	0.19	Down
Larval carcass	3 ± 0	0 of 4	0.66	None
S2 cells (growing)	2 ± 0	0 of 4	0.59	None
Whole fly	4 ± 0	0 of 4

Looking for CG3339-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720