FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3350-RA through 18771 annotations produced 1 hits

bigmax (bigmax):

Annotation Number : CG3350
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0039509
Gbrowse : chr3R:23113086-23114217 (-) // 100.0 //
Probeset : 1628490_at
Accessions : protein= NP_651556;, nucleotide= NM_143299;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // non-traceable author sta
Interpro : 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarit
FlyMine data for FBgn0039509.
BDGP gene expression has embryonic in situ data for bigmax: 6 pix of staining in 2 body parts.
TRiP has 3 RNAi stocks for FBgn0039509 available for purchase.
VDRC has 2 RNAi stocks for FBgn0039509 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	140 ± 2	4 of 4	1.00	None
Head	194 ± 3	4 of 4	1.40	Up
Eye	263 ± 12	4 of 4	1.84	Up
Thoracicoabdominal ganglion	114 ± 5	4 of 4	0.80	Down
Salivary gland	221 ± 13	4 of 4	1.54	Up
Crop	189 ± 5	4 of 4	1.30	Up
Midgut	293 ± 15	4 of 4	2.00	Up
Tubule	588 ± 52	4 of 4	4.10	Up
Hindgut	185 ± 6	4 of 4	1.30	Up
Heart	269 ± 19	4 of 4	1.87	Up
Fat body	309 ± 8	4 of 4	2.15	Up
Ovary	127 ± 2	4 of 4	0.90	Down
Testis	19 ± 1	4 of 4	0.10	Down
Male accessory glands	220 ± 12	4 of 4	1.50	Up
Virgin spermatheca	341 ± 9	4 of 4	2.38	Up
Mated spermatheca	276 ± 15	4 of 4	1.93	Up
Adult carcass	239 ± 8	4 of 4	1.70	Up
Larval CNS	80 ± 4	4 of 4	0.56	Down
Larval Salivary gland	119 ± 4	4 of 4	0.83	Down
Larval midgut	206 ± 10	4 of 4	1.43	Up
Larval tubule	319 ± 15	4 of 4	2.20	Up
Larval hindgut	124 ± 15	4 of 4	0.86	None
Larval fat body	446 ± 52	4 of 4	3.10	Up
Larval trachea	143 ± 40	4 of 4	1.00	None
Larval carcass	90 ± 8	4 of 4	0.63	Down
S2 cells (growing)	115 ± 2	4 of 4	0.81	Down
Whole fly	143 ± 4	4 of 4

Looking for CG3350-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720