FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3356-RA through 18771 annotations produced 1 hits

(CG3356):

Annotation Number : CG3356
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034989
Gbrowse : chr2R:20085404-20089710 (+) // 100.0 //
Probeset : 1629021_at
Accessions : protein= NP_611896;, nucleotide= NM_138052;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0004842 // ubiquitin-protein ligase activity // inferred from electronic annotation /// 0016874 // ligase activity // in
FlyMine data for FBgn0034989.
BDGP gene expression has embryonic in situ data for CG3356: 4 pix of staining in 1 body parts.
Homophila reports that CG3356 is a close match (1e-23) to human gene HERC2;SHEP1 (NP_004658), a gene associated with [Skin/hair/eye pigmentation 1, blond/brown hair], 227220 (3);[Skin/hair/eye pigmentation 1, blue/nonblue eyes], 227220 (3).
TRiP has 1 RNAi stocks for FBgn0034989 available for purchase.
VDRC has 3 RNAi stocks for FBgn0034989 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	236 ± 10	4 of 4	1.30	Up
Head	166 ± 12	4 of 4	0.90	None
Eye	180 ± 9	4 of 4	0.99	None
Thoracicoabdominal ganglion	230 ± 10	4 of 4	1.30	None
Salivary gland	229 ± 15	4 of 4	1.26	None
Crop	197 ± 10	4 of 4	1.10	None
Midgut	183 ± 6	4 of 4	1.00	None
Tubule	193 ± 11	4 of 4	1.10	None
Hindgut	225 ± 6	4 of 4	1.20	None
Heart	262 ± 6	4 of 4	1.44	Up
Fat body	337 ± 13	4 of 4	1.86	Up
Ovary	289 ± 7	4 of 4	1.60	Up
Testis	327 ± 5	4 of 4	1.80	Up
Male accessory glands	178 ± 4	4 of 4	1.00	None
Virgin spermatheca	192 ± 9	4 of 4	1.06	None
Mated spermatheca	185 ± 4	4 of 4	1.02	None
Adult carcass	214 ± 21	4 of 4	1.20	None
Larval CNS	189 ± 6	4 of 4	1.04	None
Larval Salivary gland	170 ± 6	4 of 4	0.93	None
Larval midgut	165 ± 10	4 of 4	0.91	None
Larval tubule	208 ± 7	4 of 4	1.10	None
Larval hindgut	238 ± 12	4 of 4	1.31	Up
Larval fat body	148 ± 15	4 of 4	0.80	None
Larval trachea	161 ± 10	4 of 4	0.89	None
Larval carcass	231 ± 38	4 of 4	1.27	None
S2 cells (growing)	244 ± 5	4 of 4	1.34	Up
Whole fly	181 ± 17	4 of 4

Looking for CG3356-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720