Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG3360-RA through 18771 annotations produced 1 hits



Cyp313a1 (Cyp313a1):

Annotation Number : CG3360
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038236
Gbrowse : chr3R:10346792-10348696 (+) // 100.0 //
Probeset : 1634662_at
Accessions : protein= NP_650368;, nucleotide= NM_142111;
Pathway : 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane //
Interpro : 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred fro
FlyMine data for FBgn0038236.
Homophila reports that CG3360 is a close match (2e-11) to human gene CPD6;CYP2D6;P450DB1 (NP_001020332), a gene associated with Codeine sensitivity (3);Debrisoquine sensitivity (3);{?Parkinsonism, susceptibility to} (1).
VDRC has 3 RNAi stocks for FBgn0038236 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain21 34 of 4 0.10Down
Head2568 984 of 4 9.90Up
Eye1741 1474 of 4 6.75Up
Thoracicoabdominal ganglion8 42 of 4 0.00Down
Salivary gland19 52 of 4 0.07Down
Crop5 21 of 4 0.00Down
Midgut5 00 of 4 0.00Down
Tubule6 00 of 4 0.00Down
Hindgut6 02 of 4 0.00Down
Heart19 34 of 4 0.08Down
Fat body12 52 of 4 0.05Down
Ovary3 00 of 4 0.00Down
Testis3 01 of 4 0.00Down
Male accessory glands8 20 of 4 0.00Down
Virgin spermatheca6 11 of 4 0.02Down
Mated spermatheca8 22 of 4 0.03Down
Adult carcass1043 604 of 4 4.00Up
Larval CNS3 12 of 4 0.01Down
Larval Salivary gland5 10 of 4 0.02Down
Larval midgut7 20 of 4 0.03Down
Larval tubule5 12 of 4 0.00Down
Larval hindgut4 12 of 4 0.02Down
Larval fat body11 11 of 4 0.00Down
Larval trachea25 481 of 4 0.10Down
Larval carcass5 10 of 4 0.02Down
S2 cells (growing)3 01 of 4 0.02Down
Whole fly258 184 of 4

Looking for CG3360-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime