FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3402-RA through 18771 annotations produced 1 hits

(CG3402):

Annotation Number : CG3402
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035148
Gbrowse : chr3L:651537-652834 (-) // 100.0 //
Probeset : 1638846_at
Accessions : protein= NP_612045;, nucleotide= NM_138201;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physic
FlyMine data for FBgn0035148.
BDGP gene expression has embryonic in situ data for CG3402: 4 pix of staining in 1 body parts.
BioGrid reports that CG3402 interacts with CG9747 CG6207 Dmel CG34383 .
VDRC has 3 RNAi stocks for FBgn0035148 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	110 ± 0	4 of 4	0.90	None
Head	60 ± 2	4 of 4	0.50	Down
Eye	83 ± 3	4 of 4	0.70	Down
Thoracicoabdominal ganglion	93 ± 1	4 of 4	0.80	Down
Salivary gland	119 ± 15	4 of 4	1.00	None
Crop	58 ± 3	4 of 4	0.50	Down
Midgut	51 ± 0	4 of 4	0.40	Down
Tubule	35 ± 2	3 of 4	0.30	Down
Hindgut	64 ± 1	4 of 4	0.50	Down
Heart	60 ± 3	4 of 4	0.51	Down
Fat body	48 ± 6	0 of 4	0.40	Down
Ovary	291 ± 6	4 of 4	2.40	Up
Testis	45 ± 1	4 of 4	0.40	Down
Male accessory glands	81 ± 3	4 of 4	0.70	Down
Virgin spermatheca	74 ± 9	4 of 4	0.63	Down
Mated spermatheca	92 ± 4	4 of 4	0.77	Down
Adult carcass	44 ± 5	0 of 4	0.40	Down
Larval CNS	212 ± 7	4 of 4	1.77	Up
Larval Salivary gland	203 ± 5	4 of 4	1.70	Up
Larval midgut	60 ± 4	3 of 4	0.50	Down
Larval tubule	42 ± 3	4 of 4	0.40	Down
Larval hindgut	134 ± 7	4 of 4	1.13	None
Larval fat body	48 ± 5	4 of 4	0.40	Down
Larval trachea	326 ± 25	4 of 4	2.73	Up
Larval carcass	115 ± 7	4 of 4	0.97	None
S2 cells (growing)	293 ± 10	4 of 4	2.46	Up
Whole fly	119 ± 4	4 of 4

Looking for CG3402-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720