FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3413-RB through 18771 annotations produced 1 hits

windpipe (wdp):

Annotation Number : CG3413
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034718
Gbrowse : chr2R:18185717-18199425 (-) // 100.0 //
Probeset : 1641504_s_at
Accessions : protein= NP_611661; /// NP_726187; /// NP_726188; /// NP_726189;, nucleotide= NM_137817; /// NM_166524; /// NM_166525; /// NM_166526;
Pathway : 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // non-traceable author statemen
Interpro : 0005515 // protein binding // inferred from electronic annotation
FlyMine data for FBgn0034718.
TRiP has 1 RNAi stocks for FBgn0034718 available for purchase.
VDRC has 2 RNAi stocks for FBgn0034718 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	216 ± 14	4 of 4	0.70	Down
Head	406 ± 19	4 of 4	1.40	Up
Eye	378 ± 27	4 of 4	1.27	None
Thoracicoabdominal ganglion	835 ± 45	4 of 4	2.80	Up
Salivary gland	1716 ± 39	4 of 4	5.77	Up
Crop	162 ± 10	4 of 4	0.50	Down
Midgut	1302 ± 23	4 of 4	4.40	Up
Tubule	1026 ± 54	4 of 4	3.40	Up
Hindgut	909 ± 14	4 of 4	3.10	Up
Heart	526 ± 18	4 of 4	1.77	Up
Fat body	844 ± 14	4 of 4	2.84	Up
Ovary	67 ± 10	4 of 4	0.20	Down
Testis	317 ± 5	4 of 4	1.10	None
Male accessory glands	56 ± 5	4 of 4	0.20	Down
Virgin spermatheca	472 ± 8	4 of 4	1.59	Up
Mated spermatheca	577 ± 25	4 of 4	1.94	Up
Adult carcass	523 ± 30	4 of 4	1.80	Up
Larval CNS	399 ± 19	4 of 4	1.34	Up
Larval Salivary gland	205 ± 12	4 of 4	0.69	Down
Larval midgut	2152 ± 233	4 of 4	7.23	Up
Larval tubule	644 ± 7	4 of 4	2.20	Up
Larval hindgut	2275 ± 111	4 of 4	7.64	Up
Larval fat body	405 ± 29	4 of 4	1.40	Up
Larval trachea	636 ± 45	4 of 4	2.14	Up
Larval carcass	1141 ± 100	4 of 4	3.83	Up
S2 cells (growing)	805 ± 14	4 of 4	2.70	Up
Whole fly	297 ± 12	4 of 4

Looking for CG3413-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720