FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3441-RA through 18771 annotations produced 1 hits

Neuropeptide like precursor protein 1 (Nplp1):

Annotation Number : CG3441
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035092
Gbrowse : chr2R:20919902-20927520 (+) // 100.0 //
Probeset : 1628450_at
Accessions : protein= NP_001036570; /// NP_001137760; /// NP_611993;, nucleotide= NM_001043105; /// NM_001144288; /// NM_138149;
Pathway : 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from e
Interpro : 0005184 // neuropeptide hormone activity // non-traceable author statement
FlyMine data for FBgn0035092.
BDGP gene expression has embryonic in situ data for CG3441: 26 pix of staining in 3 body parts.
BioGrid reports that CG3441 interacts with CG4832 CG5939 CG7238 .
TRiP has 1 RNAi stocks for FBgn0035092 available for purchase.
VDRC has 2 RNAi stocks for FBgn0035092 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1019 ± 28	4 of 4	9.60	Up
Head	289 ± 19	4 of 4	2.70	Up
Eye	19 ± 1	4 of 4	0.18	Down
Thoracicoabdominal ganglion	3692 ± 134	4 of 4	34.80	Up
Salivary gland	13 ± 1	0 of 4	0.12	Down
Crop	5 ± 1	0 of 4	0.10	Down
Midgut	3 ± 1	0 of 4	0.00	Down
Tubule	3 ± 0	0 of 4	0.00	Down
Hindgut	3 ± 1	0 of 4	0.00	Down
Heart	6 ± 1	2 of 4	0.06	Down
Fat body	17 ± 6	4 of 4	0.16	Down
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	2 ± 1	1 of 4	0.00	Down
Male accessory glands	3 ± 1	0 of 4	0.00	Down
Virgin spermatheca	17 ± 2	4 of 4	0.17	Down
Mated spermatheca	17 ± 3	4 of 4	0.16	Down
Adult carcass	47 ± 12	4 of 4	0.40	Down
Larval CNS	1043 ± 105	4 of 4	9.82	Up
Larval Salivary gland	3 ± 1	0 of 4	0.03	Down
Larval midgut	3 ± 0	0 of 4	0.04	Down
Larval tubule	3 ± 1	1 of 4	0.00	Down
Larval hindgut	5 ± 0	1 of 4	0.05	Down
Larval fat body	8 ± 1	2 of 4	0.10	Down
Larval trachea	6 ± 5	2 of 4	0.06	Down
Larval carcass	9 ± 1	0 of 4	0.09	Down
S2 cells (growing)	2 ± 0	2 of 4	0.03	Down
Whole fly	106 ± 6	4 of 4

Looking for CG3441-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720