FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3446-RA through 18771 annotations produced 1 hits

NADH ubiquinone oxidoreductase B16.6 (CG3446):

Annotation Number : CG3446
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029868
Gbrowse : chrX:6243355-6244432 (-) // 100.0 //
Probeset : 1627629_at
Accessions : protein= NP_572318;, nucleotide= NM_132090;
Pathway : NADH to ubiquinone // inferred from sequence or structural similarity /// 0055114 // oxidation reduction // inferred fr
Interpro : 0005747 // mitochondrial respiratory chain complex I // inferred from sequence or structural similarity
FlyMine data for FBgn0029868.
BDGP gene expression has embryonic in situ data for CG3446: 4 pix of staining in 1 body parts.
Homophila reports that CG3446 is a close match (8e-14) to human gene GRIM19;NDUFA13 (NP_057049), a gene associated with {Thyroid carcinoma, Hurthle cell}, 607464 (3).
VDRC has 2 RNAi stocks for FBgn0029868 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	996 ± 13	4 of 4	1.40	Up
Head	1027 ± 58	4 of 4	1.50	Up
Eye	1422 ± 28	4 of 4	2.04	Up
Thoracicoabdominal ganglion	1205 ± 42	4 of 4	1.70	Up
Salivary gland	1402 ± 51	4 of 4	2.01	Up
Crop	792 ± 49	4 of 4	1.10	None
Midgut	670 ± 15	4 of 4	1.00	None
Tubule	642 ± 29	4 of 4	0.90	None
Hindgut	1108 ± 17	4 of 4	1.60	Up
Heart	1053 ± 34	4 of 4	1.51	Up
Fat body	1513 ± 198	4 of 4	2.17	Up
Ovary	313 ± 10	4 of 4	0.40	Down
Testis	306 ± 20	4 of 4	0.40	Down
Male accessory glands	708 ± 28	4 of 4	1.00	None
Virgin spermatheca	1598 ± 46	4 of 4	2.29	Up
Mated spermatheca	1338 ± 53	4 of 4	1.91	Up
Adult carcass	1672 ± 90	4 of 4	2.40	Up
Larval CNS	660 ± 51	4 of 4	0.94	None
Larval Salivary gland	588 ± 55	4 of 4	0.84	None
Larval midgut	729 ± 44	4 of 4	1.04	None
Larval tubule	502 ± 36	4 of 4	0.70	Down
Larval hindgut	937 ± 58	4 of 4	1.34	Up
Larval fat body	310 ± 23	4 of 4	0.40	Down
Larval trachea	463 ± 43	4 of 4	0.66	Down
Larval carcass	1179 ± 167	4 of 4	1.69	None
S2 cells (growing)	486 ± 26	4 of 4	0.70	Down
Whole fly	698 ± 34	4 of 4

Looking for CG3446-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720