FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3476-RA through 18771 annotations produced 1 hits

(CG3476):

Annotation Number : CG3476
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031881
Gbrowse : chr2L:7027593-7028959 (+) // 100.0 //
Probeset : 1629040_at
Accessions : protein= NP_609093;, nucleotide= NM_135249;
Pathway : 0005740 // mitochondrial envelope // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0005476 // carnitine:acyl carnitine antiporte
FlyMine data for FBgn0031881.
Homophila reports that CG3476 is a close match (6e-12) to human gene ANT1;PEO3;SLC25A4;T1 (NP_001142), a gene associated with Progressive external ophthalmoplegia with mitochondrial DNA deletions, 157640 (3).
VDRC has 3 RNAi stocks for FBgn0031881 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	33 ± 1	4 of 4	0.40	Down
Head	56 ± 3	4 of 4	0.70	Down
Eye	95 ± 8	4 of 4	1.14	None
Thoracicoabdominal ganglion	45 ± 1	4 of 4	0.50	Down
Salivary gland	160 ± 6	4 of 4	1.92	Up
Crop	138 ± 7	4 of 4	1.70	Up
Midgut	157 ± 5	4 of 4	1.90	Up
Tubule	141 ± 9	4 of 4	1.70	Up
Hindgut	99 ± 4	4 of 4	1.20	Up
Heart	57 ± 1	4 of 4	0.68	Down
Fat body	52 ± 2	4 of 4	0.63	Down
Ovary	127 ± 2	4 of 4	1.50	Up
Testis	97 ± 2	4 of 4	1.20	Up
Male accessory glands	98 ± 7	4 of 4	1.20	None
Virgin spermatheca	63 ± 5	4 of 4	0.75	Down
Mated spermatheca	62 ± 3	4 of 4	0.75	Down
Adult carcass	74 ± 4	2 of 4	0.90	None
Larval CNS	43 ± 10	4 of 4	0.51	Down
Larval Salivary gland	32 ± 1	2 of 4	0.39	Down
Larval midgut	58 ± 3	3 of 4	0.70	Down
Larval tubule	43 ± 2	4 of 4	0.50	Down
Larval hindgut	42 ± 2	4 of 4	0.51	Down
Larval fat body	48 ± 2	1 of 4	0.60	Down
Larval trachea	32 ± 2	4 of 4	0.39	Down
Larval carcass	36 ± 2	4 of 4	0.44	Down
S2 cells (growing)	94 ± 6	4 of 4	1.13	None
Whole fly	83 ± 3	4 of 4

Looking for CG3476-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720