FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3560-RA through 18771 annotations produced 1 hits

Ubiquinol-cytochrome c oxidoreductase 14 kDa (CG3560):

Annotation Number : CG3560
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030733
Gbrowse : chrX:16180374-16181021 (+) // 99.15 //
Probeset : 1635023_at
Accessions : protein= NP_573110;, nucleotide= NM_132882;
Pathway : ubiquinol to cytochrome c // inferred from sequence or structural similarity /// 0006122 // mitochondrial electron tran
Interpro : ubiquinol to cytochrome c // inferred from electronic annotation /// 0055114 // oxidation reduction // inferred from el
FlyMine data for FBgn0030733.
Homophila reports that CG3560 is a close match (6e-23) to human gene UQCRB;UQBP;QPC (NP_006285), a gene associated with Mitochondrial complex III deficiency, 124000 (3).
BioGrid reports that CG3560 interacts with CG8907 CG3918 .
VDRC has 3 RNAi stocks for FBgn0030733 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2084 ± 51	4 of 4	0.80	Down
Head	2906 ± 63	4 of 4	1.20	Up
Eye	3579 ± 95	4 of 4	1.46	Up
Thoracicoabdominal ganglion	3032 ± 57	4 of 4	1.20	Up
Salivary gland	4173 ± 22	4 of 4	1.70	Up
Crop	2143 ± 116	4 of 4	0.90	None
Midgut	3275 ± 121	4 of 4	1.30	Up
Tubule	2267 ± 51	4 of 4	0.90	Down
Hindgut	3674 ± 151	4 of 4	1.50	Up
Heart	3675 ± 163	4 of 4	1.50	Up
Fat body	3705 ± 277	4 of 4	1.51	Up
Ovary	1062 ± 12	4 of 4	0.40	Down
Testis	237 ± 8	4 of 4	0.10	Down
Male accessory glands	2584 ± 56	4 of 4	1.10	None
Virgin spermatheca	2816 ± 133	4 of 4	1.15	None
Mated spermatheca	2542 ± 51	4 of 4	1.03	None
Adult carcass	5679 ± 344	4 of 4	2.30	Up
Larval CNS	1369 ± 103	4 of 4	0.56	Down
Larval Salivary gland	2318 ± 89	4 of 4	0.94	None
Larval midgut	3038 ± 31	4 of 4	1.24	Up
Larval tubule	2249 ± 147	4 of 4	0.90	None
Larval hindgut	2920 ± 72	4 of 4	1.19	Up
Larval fat body	1089 ± 126	4 of 4	0.40	Down
Larval trachea	1619 ± 92	4 of 4	0.66	Down
Larval carcass	2728 ± 205	4 of 4	1.11	None
S2 cells (growing)	1483 ± 42	4 of 4	0.60	Down
Whole fly	2457 ± 62	4 of 4

Looking for CG3560-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720