FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3582-RA through 18771 annotations produced 1 hits

U2 small nuclear riboprotein auxiliary factor 38 (U2af38):

Annotation Number : CG3582
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0017457
Gbrowse : chr2L:293336-294679 (-) // 100.0 //
Probeset : 1625231_at
Accessions : protein= NP_477208;, nucleotide= NM_057860;
Pathway : via spliceosome // inferred from mutant phenotype /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing
FlyMine data for FBgn0017457.
BDGP gene expression has embryonic in situ data for U2af38: 4 pix of staining in 1 body parts.
BioGrid reports that CG3582 interacts with CG7971 CG9998 CG8247 .
TRiP has 1 RNAi stocks for FBgn0017457 available for purchase.
VDRC has 1 RNAi stocks for FBgn0017457 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	168 ± 1	4 of 4	0.90	None
Head	129 ± 2	4 of 4	0.70	Down
Eye	140 ± 5	4 of 4	0.77	Down
Thoracicoabdominal ganglion	118 ± 5	4 of 4	0.60	Down
Salivary gland	122 ± 10	4 of 4	0.67	Down
Crop	139 ± 5	4 of 4	0.80	Down
Midgut	108 ± 2	4 of 4	0.60	Down
Tubule	98 ± 2	4 of 4	0.50	Down
Hindgut	139 ± 2	4 of 4	0.80	Down
Heart	79 ± 2	4 of 4	0.43	Down
Fat body	103 ± 14	4 of 4	0.56	Down
Ovary	347 ± 4	4 of 4	1.90	Up
Testis	169 ± 5	4 of 4	0.90	None
Male accessory glands	136 ± 11	4 of 4	0.70	Down
Virgin spermatheca	74 ± 4	4 of 4	0.41	Down
Mated spermatheca	88 ± 7	4 of 4	0.48	Down
Adult carcass	83 ± 3	4 of 4	0.50	Down
Larval CNS	293 ± 27	4 of 4	1.61	Up
Larval Salivary gland	156 ± 12	4 of 4	0.86	None
Larval midgut	82 ± 3	4 of 4	0.45	Down
Larval tubule	116 ± 6	4 of 4	0.60	Down
Larval hindgut	125 ± 2	4 of 4	0.69	Down
Larval fat body	82 ± 6	4 of 4	0.50	Down
Larval trachea	142 ± 12	4 of 4	0.78	Down
Larval carcass	137 ± 12	4 of 4	0.75	Down
S2 cells (growing)	229 ± 7	4 of 4	1.26	Up
Whole fly	182 ± 5	4 of 4

Looking for CG3582-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720