FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3599-RA through 18771 annotations produced 1 hits

CG3599 (Btd):

Annotation Number : CG3599
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029848
Gbrowse : chrX:6111512-6113327 (-) // 100.0 //
Probeset : 1627262_at
Accessions : protein= NP_572298;, nucleotide= NM_132070;
Interpro : "0016787 // hydrolase activity // inferred from electronic annotation /// 0016810 // hydrolase activity
FlyMine data for FBgn0029848.
Homophila reports that CG3599 is a close match (6e-35) to human gene HDLCQ8;VNN1 (NP_004657), a gene associated with [High density lipoprotein cholesterol level QTL 8] (3).
VDRC has 3 RNAi stocks for FBgn0029848 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.40	None
Head	1 ± 0	0 of 4	0.40	None
Eye	0 ± 0	0 of 4	0.19	Down
Thoracicoabdominal ganglion	2 ± 2	0 of 4	0.70	None
Salivary gland	5 ± 3	0 of 4	1.35	None
Crop	4 ± 1	0 of 4	1.10	None
Midgut	3 ± 1	0 of 4	0.80	None
Tubule	25 ± 10	2 of 4	6.30	None
Hindgut	80 ± 16	4 of 4	20.20	Up
Heart	1 ± 0	0 of 4	0.31	None
Fat body	16 ± 23	1 of 4	4.01	None
Ovary	1 ± 1	0 of 4	0.50	None
Testis	1 ± 0	0 of 4	0.30	Down
Male accessory glands	4 ± 1	0 of 4	1.20	None
Virgin spermatheca	2 ± 0	0 of 4	0.60	None
Mated spermatheca	1 ± 0	0 of 4	0.45	None
Adult carcass	2 ± 0	0 of 4	0.50	None
Larval CNS	1 ± 0	0 of 4	0.26	Down
Larval Salivary gland	1 ± 0	0 of 4	0.43	None
Larval midgut	1 ± 0	0 of 4	0.48	None
Larval tubule	1123 ± 119	4 of 4	282.60	Up
Larval hindgut	32 ± 10	4 of 4	8.09	None
Larval fat body	2 ± 0	0 of 4	0.60	None
Larval trachea	2 ± 2	0 of 4	0.50	None
Larval carcass	2 ± 1	0 of 4	0.60	None
S2 cells (growing)	2 ± 1	0 of 4	0.66	None
Whole fly	4 ± 0	1 of 4

Looking for CG3599-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720