FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3605-RA through 18771 annotations produced 1 hits

(CG3605):

Annotation Number : CG3605
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031493
Gbrowse : chr2L:3026527-3029189 (-) // 100.0 //
Probeset : 1638857_at
Accessions : protein= NP_608739;, nucleotide= NM_134895;
Pathway : via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred from sequence or structural similarity /// 0006397 // mRNA processing // inferred from elec
FlyMine data for FBgn0031493.
BDGP gene expression has embryonic in situ data for CG3605: 24 pix of staining in 22 body parts.
BioGrid reports that CG3605 interacts with CG3780 CG4276 CG7057 CG8854 .
TRiP has 1 RNAi stocks for FBgn0031493 available for purchase.
VDRC has 3 RNAi stocks for FBgn0031493 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	170 ± 5	4 of 4	1.10	None
Head	106 ± 1	4 of 4	0.70	Down
Eye	161 ± 8	4 of 4	1.01	None
Thoracicoabdominal ganglion	153 ± 3	4 of 4	1.00	None
Salivary gland	140 ± 11	4 of 4	0.88	None
Crop	127 ± 4	4 of 4	0.80	Down
Midgut	83 ± 1	4 of 4	0.50	Down
Tubule	162 ± 10	4 of 4	1.00	None
Hindgut	115 ± 7	4 of 4	0.70	Down
Heart	84 ± 2	4 of 4	0.53	Down
Fat body	110 ± 10	4 of 4	0.70	Down
Ovary	340 ± 1	4 of 4	2.10	Up
Testis	96 ± 6	4 of 4	0.60	Down
Male accessory glands	189 ± 13	4 of 4	1.20	None
Virgin spermatheca	189 ± 4	4 of 4	1.19	Up
Mated spermatheca	201 ± 2	4 of 4	1.27	Up
Adult carcass	97 ± 4	4 of 4	0.60	Down
Larval CNS	403 ± 13	4 of 4	2.53	Up
Larval Salivary gland	173 ± 10	4 of 4	1.09	None
Larval midgut	72 ± 1	4 of 4	0.46	Down
Larval tubule	108 ± 1	4 of 4	0.70	Down
Larval hindgut	124 ± 5	4 of 4	0.78	Down
Larval fat body	121 ± 5	4 of 4	0.80	Down
Larval trachea	209 ± 10	4 of 4	1.32	Up
Larval carcass	151 ± 6	4 of 4	0.95	None
S2 cells (growing)	153 ± 5	4 of 4	0.96	None
Whole fly	159 ± 4	4 of 4

Looking for CG3605-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720