FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3609-RA through 18771 annotations produced 1 hits

(CG3609):

Annotation Number : CG3609
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031418
Gbrowse : chr2L:2372509-2373722 (-) // 97.81 //
Probeset : 1628271_at
Accessions : protein= NP_608675;, nucleotide= NM_134831;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic
FlyMine data for FBgn0031418.
VDRC has 2 RNAi stocks for FBgn0031418 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	112 ± 3	4 of 4	0.30	Down
Head	467 ± 52	4 of 4	1.20	None
Eye	212 ± 14	4 of 4	0.53	Down
Thoracicoabdominal ganglion	148 ± 5	4 of 4	0.40	Down
Salivary gland	933 ± 31	4 of 4	2.33	Up
Crop	478 ± 13	4 of 4	1.20	Up
Midgut	2862 ± 106	4 of 4	7.10	Up
Tubule	1195 ± 73	4 of 4	3.00	Up
Hindgut	443 ± 1	4 of 4	1.10	None
Heart	1108 ± 95	4 of 4	2.77	Up
Fat body	1160 ± 166	4 of 4	2.90	Up
Ovary	188 ± 6	4 of 4	0.50	Down
Testis	138 ± 4	4 of 4	0.30	Down
Male accessory glands	282 ± 10	4 of 4	0.70	Down
Virgin spermatheca	904 ± 68	4 of 4	2.26	Up
Mated spermatheca	545 ± 93	4 of 4	1.36	None
Adult carcass	1299 ± 95	4 of 4	3.20	Up
Larval CNS	134 ± 11	4 of 4	0.34	Down
Larval Salivary gland	606 ± 44	4 of 4	1.52	Up
Larval midgut	359 ± 45	4 of 4	0.90	None
Larval tubule	331 ± 10	4 of 4	0.80	Down
Larval hindgut	197 ± 9	4 of 4	0.49	Down
Larval fat body	70 ± 8	4 of 4	0.20	Down
Larval trachea	375 ± 28	4 of 4	0.94	None
Larval carcass	261 ± 25	4 of 4	0.65	Down
S2 cells (growing)	281 ± 8	4 of 4	0.70	Down
Whole fly	400 ± 21	4 of 4

Looking for CG3609-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720