FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3615-RA through 18771 annotations produced 1 hits

Autophagy-specific gene 9 (Atg9):

Annotation Number : CG3615
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034110
Gbrowse : chr2R:12181906-12184740 (+) // 100.0 //
Probeset : 1626033_at
Accessions : protein= NP_611114;, nucleotide= NM_137270;
FlyMine data for FBgn0034110.
BDGP gene expression has embryonic in situ data for CG3615: 27 pix of staining in 5 body parts.
TRiP has 2 RNAi stocks for FBgn0034110 available for purchase.
VDRC has 1 RNAi stocks for FBgn0034110 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	83 ± 2	4 of 4	0.80	Down
Head	122 ± 4	4 of 4	1.10	None
Eye	117 ± 5	4 of 4	1.07	None
Thoracicoabdominal ganglion	94 ± 2	4 of 4	0.90	Down
Salivary gland	176 ± 11	4 of 4	1.60	Up
Crop	177 ± 7	4 of 4	1.60	Up
Midgut	202 ± 5	4 of 4	1.80	Up
Tubule	204 ± 9	4 of 4	1.90	Up
Hindgut	192 ± 4	4 of 4	1.70	Up
Heart	174 ± 7	4 of 4	1.58	Up
Fat body	259 ± 19	4 of 4	2.35	Up
Ovary	107 ± 2	4 of 4	1.00	None
Testis	23 ± 1	4 of 4	0.20	Down
Male accessory glands	172 ± 7	4 of 4	1.60	Up
Virgin spermatheca	300 ± 20	4 of 4	2.73	Up
Mated spermatheca	210 ± 6	4 of 4	1.91	Up
Adult carcass	210 ± 5	4 of 4	1.90	Up
Larval CNS	73 ± 3	4 of 4	0.66	Down
Larval Salivary gland	94 ± 3	4 of 4	0.86	Down
Larval midgut	377 ± 45	4 of 4	3.43	Up
Larval tubule	504 ± 19	4 of 4	4.60	Up
Larval hindgut	256 ± 33	4 of 4	2.33	Up
Larval fat body	164 ± 19	4 of 4	1.50	None
Larval trachea	139 ± 34	4 of 4	1.26	None
Larval carcass	494 ± 83	4 of 4	4.49	Up
S2 cells (growing)	245 ± 3	4 of 4	2.23	Up
Whole fly	110 ± 4	4 of 4

Looking for CG3615-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720