FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3662-RA through 18771 annotations produced 1 hits

(CG3662):

Annotation Number : CG3662
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031285
Gbrowse : chr2L:821417-824341 (+) // 100.0 //
Probeset : 1633012_at
Accessions : protein= NP_001033867; /// NP_001162847; /// NP_608549;, nucleotide= NM_001038778; /// NM_001169376; /// NM_134705;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0031285.
BDGP gene expression has embryonic in situ data for CG3662: 4 pix of staining in 1 body parts.
BioGrid reports that CG3662 interacts with CG9837 CG5073 CG5380 CG5440 CG6660 CG9665 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3007 ± 74	4 of 4	2.30	Up
Head	2678 ± 84	4 of 4	2.10	Up
Eye	1310 ± 46	4 of 4	1.01	None
Thoracicoabdominal ganglion	3120 ± 67	4 of 4	2.40	Up
Salivary gland	3842 ± 257	4 of 4	2.97	Up
Crop	2630 ± 81	4 of 4	2.00	Up
Midgut	2485 ± 56	4 of 4	1.90	Up
Tubule	2581 ± 101	4 of 4	2.00	Up
Hindgut	2560 ± 49	4 of 4	2.00	Up
Heart	1801 ± 57	4 of 4	1.39	Up
Fat body	1807 ± 122	4 of 4	1.40	Up
Ovary	852 ± 24	4 of 4	0.70	Down
Testis	1260 ± 31	4 of 4	1.00	None
Male accessory glands	2876 ± 144	4 of 4	2.20	Up
Virgin spermatheca	2318 ± 82	4 of 4	1.79	Up
Mated spermatheca	2076 ± 202	4 of 4	1.60	Up
Adult carcass	1536 ± 84	4 of 4	1.20	None
Larval CNS	1213 ± 80	4 of 4	0.94	None
Larval Salivary gland	781 ± 96	4 of 4	0.60	Down
Larval midgut	2933 ± 96	4 of 4	2.27	Up
Larval tubule	1331 ± 36	4 of 4	1.00	None
Larval hindgut	1950 ± 133	4 of 4	1.51	Up
Larval fat body	1145 ± 41	4 of 4	0.90	None
Larval trachea	656 ± 141	4 of 4	0.51	Down
Larval carcass	418 ± 28	4 of 4	0.32	Down
S2 cells (growing)	994 ± 37	4 of 4	0.77	Down
Whole fly	1294 ± 77	4 of 4

Looking for CG3662-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720