FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3664-RB through 18771 annotations produced 1 hits

Rab-protein 5 (Rab5):

Annotation Number : CG3664
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014010
Gbrowse : chr2L:2359545-2365362 (-) // 100.0 //
Probeset : 1634895_s_at
Accessions : protein= NP_523457; /// NP_722795; /// NP_722796; /// NP_722797; /// NP_722798; /// NP_722799;, nucleotide= NM_078733; /// NM_164475; /// NM_164476; /// NM_164477; /// NM_164478; /// NM_164479;
Pathway : 0005769 // early endosome // inferred from direct assay /// 0005769 // early endosome // non-traceable author statement
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from seq
FlyMine data for FBgn0014010.
BDGP gene expression has embryonic in situ data for Rab5: 21 pix of staining in 16 body parts.
Homophila reports that CG3664 is a close match (1e-13) to human gene HRAS (NP_789765), a gene associated with Costello syndrome, 218040 (3);{Bladder cancer, somatic}, 109800 (3);{Thyroid carcinoma, follicular, somatic}, 188470 (3).
TRiP has 2 RNAi stocks for FBgn0014010 available for purchase.
VDRC has 3 RNAi stocks for FBgn0014010 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	803 ± 13	4 of 4	1.80	Up
Head	901 ± 52	4 of 4	2.00	Up
Eye	2154 ± 39	4 of 4	4.76	Up
Thoracicoabdominal ganglion	984 ± 45	4 of 4	2.20	Up
Salivary gland	738 ± 26	4 of 4	1.63	Up
Crop	1165 ± 32	4 of 4	2.60	Up
Midgut	645 ± 14	4 of 4	1.40	Up
Tubule	1008 ± 46	4 of 4	2.20	Up
Hindgut	982 ± 9	4 of 4	2.20	Up
Heart	1247 ± 43	4 of 4	2.75	Up
Fat body	622 ± 107	4 of 4	1.37	Up
Ovary	380 ± 2	4 of 4	0.80	Down
Testis	194 ± 8	4 of 4	0.40	Down
Male accessory glands	729 ± 43	4 of 4	1.60	Up
Virgin spermatheca	1105 ± 17	4 of 4	2.44	Up
Mated spermatheca	1191 ± 61	4 of 4	2.63	Up
Adult carcass	732 ± 25	4 of 4	1.60	Up
Larval CNS	563 ± 46	4 of 4	1.24	Up
Larval Salivary gland	514 ± 25	4 of 4	1.14	None
Larval midgut	743 ± 62	4 of 4	1.64	Up
Larval tubule	1895 ± 33	4 of 4	4.20	Up
Larval hindgut	903 ± 20	4 of 4	2.00	Up
Larval fat body	833 ± 44	4 of 4	1.80	Up
Larval trachea	739 ± 62	4 of 4	1.63	Up
Larval carcass	443 ± 33	4 of 4	0.98	None
S2 cells (growing)	764 ± 22	4 of 4	1.69	Up
Whole fly	452 ± 14	4 of 4

Looking for CG3664-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720