FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3675-RA through 18771 annotations produced 1 hits

Arginine methyltransferase 2 (Art2):

Annotation Number : CG3675
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031592
Gbrowse : chr2L:4278038-4279290 (-) // 100.0 //
Probeset : 1639915_at
Accessions : protein= NP_608821;, nucleotide= NM_134977;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008168 // methyltransferase activity // inferred f
FlyMine data for FBgn0031592.
BioGrid reports that CG3675 interacts with CG9927 .
VDRC has 3 RNAi stocks for FBgn0031592 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	10 ± 1	4 of 4	1.40	None
Head	3 ± 1	0 of 4	0.40	None
Eye	2 ± 1	0 of 4	0.37	Down
Thoracicoabdominal ganglion	11 ± 3	1 of 4	1.40	None
Salivary gland	3 ± 1	0 of 4	0.50	None
Crop	2 ± 0	0 of 4	0.30	Down
Midgut	2 ± 0	0 of 4	0.30	Down
Tubule	3 ± 0	0 of 4	0.50	Down
Hindgut	2 ± 0	0 of 4	0.30	Down
Heart	1 ± 0	0 of 4	0.24	Down
Fat body	6 ± 5	0 of 4	0.77	None
Ovary	4 ± 1	1 of 4	0.60	None
Testis	63 ± 3	4 of 4	8.20	Up
Male accessory glands	5 ± 2	0 of 4	0.70	None
Virgin spermatheca	2 ± 0	0 of 4	0.25	Down
Mated spermatheca	4 ± 1	0 of 4	0.53	None
Adult carcass	2 ± 0	0 of 4	0.30	Down
Larval CNS	4 ± 2	0 of 4	0.61	None
Larval Salivary gland	1 ± 0	0 of 4	0.23	Down
Larval midgut	3 ± 1	0 of 4	0.41	None
Larval tubule	2 ± 0	0 of 4	0.30	Down
Larval hindgut	3 ± 0	0 of 4	0.41	Down
Larval fat body	8 ± 3	1 of 4	1.10	None
Larval trachea	2 ± 1	0 of 4	0.28	Down
Larval carcass	5 ± 1	0 of 4	0.66	None
S2 cells (growing)	2 ± 0	0 of 4	0.28	Down
Whole fly	7 ± 1	3 of 4

Looking for CG3675-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720