FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3689-RB through 18771 annotations produced 1 hits

(CG3689):

Annotation Number : CG3689
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035987
Gbrowse : chr3L:9404158-9406735 (+) // 100.0 //
Probeset : 1627850_at
Accessions : protein= NP_001036597; /// NP_648308;, nucleotide= NM_001043132; /// NM_140051;
Pathway : 0005849 // mRNA cleavage factor complex // inferred from sequence or structural similarity
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0016787 // hydrolase activity // inferred from elec
FlyMine data for FBgn0035987.
BDGP gene expression has embryonic in situ data for CG3689: 9 pix of staining in 5 body parts.
BioGrid reports that CG3689 interacts with CG7185 CG5468 CG5731 CG7061 CG7937 CG8854 CG9653 .
TRiP has 1 RNAi stocks for FBgn0035987 available for purchase.
VDRC has 4 RNAi stocks for FBgn0035987 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	429 ± 11	4 of 4	2.00	Up
Head	138 ± 2	4 of 4	0.60	Down
Eye	124 ± 6	4 of 4	0.58	Down
Thoracicoabdominal ganglion	265 ± 3	4 of 4	1.20	Up
Salivary gland	139 ± 6	4 of 4	0.65	Down
Crop	132 ± 5	4 of 4	0.60	Down
Midgut	124 ± 2	4 of 4	0.60	Down
Tubule	178 ± 5	4 of 4	0.80	Down
Hindgut	129 ± 2	4 of 4	0.60	Down
Heart	63 ± 3	4 of 4	0.30	Down
Fat body	84 ± 6	4 of 4	0.39	Down
Ovary	424 ± 23	4 of 4	2.00	Up
Testis	35 ± 3	4 of 4	0.20	Down
Male accessory glands	382 ± 4	4 of 4	1.80	Up
Virgin spermatheca	88 ± 4	4 of 4	0.41	Down
Mated spermatheca	87 ± 2	4 of 4	0.41	Down
Adult carcass	86 ± 2	4 of 4	0.40	Down
Larval CNS	505 ± 32	4 of 4	2.36	Up
Larval Salivary gland	219 ± 11	4 of 4	1.02	None
Larval midgut	72 ± 4	4 of 4	0.34	Down
Larval tubule	226 ± 12	4 of 4	1.10	None
Larval hindgut	107 ± 3	4 of 4	0.50	Down
Larval fat body	155 ± 7	4 of 4	0.70	Down
Larval trachea	262 ± 9	4 of 4	1.22	Up
Larval carcass	131 ± 4	4 of 4	0.61	Down
S2 cells (growing)	296 ± 5	4 of 4	1.38	Up
Whole fly	214 ± 15	4 of 4

Looking for CG3689-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720