FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3699-RA through 18771 annotations produced 1 hits

(CG3699):

Annotation Number : CG3699
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040349
Gbrowse : chrX:840690-841517 (-) // 99.4 //
Probeset : 1629853_at
Accessions : protein= NP_569875;, nucleotide= NM_130519;
Interpro : "0003824 // catalytic activity // inferred from electronic annotation /// 0005488 // binding // inferred from electronic
FlyMine data for FBgn0040349.
BDGP gene expression has embryonic in situ data for EG:BACR7A4.14: 16 pix of staining in 5 body parts.
Homophila reports that CG3699 is a close match (4e-11) to human gene HSD17B4 (NP_000405), a gene associated with D-bifunctional protein deficiency, 261515 (3).
VDRC has 4 RNAi stocks for FBgn0040349 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	9 ± 2	3 of 4	0.00	Down
Head	576 ± 70	4 of 4	2.50	Up
Eye	163 ± 62	4 of 4	0.71	None
Thoracicoabdominal ganglion	12 ± 3	3 of 4	0.10	Down
Salivary gland	6 ± 1	0 of 4	0.03	Down
Crop	8 ± 3	2 of 4	0.00	Down
Midgut	1671 ± 95	4 of 4	7.30	Up
Tubule	4152 ± 85	4 of 4	18.10	Up
Hindgut	84 ± 8	4 of 4	0.40	Down
Heart	468 ± 44	4 of 4	2.05	Up
Fat body	773 ± 176	4 of 4	3.38	Up
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	4 ± 0	1 of 4	0.00	Down
Male accessory glands	4 ± 2	0 of 4	0.00	Down
Virgin spermatheca	1029 ± 100	4 of 4	4.50	Up
Mated spermatheca	138 ± 60	4 of 4	0.61	None
Adult carcass	708 ± 81	4 of 4	3.10	Up
Larval CNS	1 ± 0	0 of 4	0.00	Down
Larval Salivary gland	1 ± 0	0 of 4	0.01	Down
Larval midgut	503 ± 89	4 of 4	2.20	None
Larval tubule	2155 ± 93	4 of 4	9.40	Up
Larval hindgut	49 ± 3	4 of 4	0.22	Down
Larval fat body	113 ± 10	4 of 4	0.50	Down
Larval trachea	7 ± 4	3 of 4	0.03	Down
Larval carcass	3 ± 1	0 of 4	0.02	Down
S2 cells (growing)	0 ± 0	0 of 4	0.00	Down
Whole fly	228 ± 22	4 of 4

Looking for CG3699-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720