FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3715-RA through 18771 annotations produced 1 hits

SHC-adaptor protein (Shc):

Annotation Number : CG3715
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0015296
Gbrowse : chr3L:9420099-9421779 (+) // 100.0 //
Probeset : 1623967_at
Accessions : protein= NP_524683;, nucleotide= NM_079944;
Pathway : open tracheal system // inferred from mutant phenotype /// 0008293 // torso signaling pathway // inferred from genetic
FlyMine data for FBgn0015296.
BDGP gene expression has embryonic in situ data for Shc: 4 pix of staining in 1 body parts.
BioGrid reports that CG3715 interacts with CG5502 CG10079 CG1389 .
VDRC has 2 RNAi stocks for FBgn0015296 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	140 ± 4	4 of 4	1.20	Up
Head	81 ± 1	4 of 4	0.70	Down
Eye	116 ± 4	4 of 4	0.98	None
Thoracicoabdominal ganglion	106 ± 5	4 of 4	0.90	None
Salivary gland	100 ± 4	4 of 4	0.85	Down
Crop	165 ± 5	4 of 4	1.40	Up
Midgut	93 ± 7	4 of 4	0.80	Down
Tubule	104 ± 3	4 of 4	0.90	Down
Hindgut	113 ± 2	4 of 4	1.00	None
Heart	130 ± 6	4 of 4	1.10	None
Fat body	52 ± 6	4 of 4	0.44	Down
Ovary	211 ± 4	4 of 4	1.80	Up
Testis	138 ± 4	4 of 4	1.20	Up
Male accessory glands	74 ± 6	4 of 4	0.60	Down
Virgin spermatheca	51 ± 3	4 of 4	0.44	Down
Mated spermatheca	56 ± 1	4 of 4	0.48	Down
Adult carcass	82 ± 8	4 of 4	0.70	Down
Larval CNS	290 ± 11	4 of 4	2.45	Up
Larval Salivary gland	98 ± 5	4 of 4	0.83	Down
Larval midgut	126 ± 6	4 of 4	1.07	None
Larval tubule	162 ± 5	4 of 4	1.40	Up
Larval hindgut	144 ± 6	4 of 4	1.22	Up
Larval fat body	123 ± 7	4 of 4	1.00	None
Larval trachea	232 ± 16	4 of 4	1.96	Up
Larval carcass	117 ± 8	4 of 4	0.99	None
S2 cells (growing)	567 ± 13	4 of 4	4.78	Up
Whole fly	118 ± 3	4 of 4

Looking for CG3715-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720