FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3752-RA through 18771 annotations produced 1 hits

Acetaldehyde dehydrogenase (Aldh):

Annotation Number : CG3752
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0012036
Gbrowse : chr2L:9387388-9391679 (+) // 100.0 //
Probeset : 1634096_at
Accessions : protein= NP_609285;, nucleotide= NM_135441;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005739 // mitochondrion // inferred from direct assay /// 000573
Interpro : 0004029 // aldehyde dehydrogenase (NAD) activity // inferred from direct assay /// 0004029 // aldehyde dehydrogenase (NA
FlyMine data for FBgn0012036.
Homophila reports that CG3752 is a close match (2e-25) to human gene ALDH4;ALDH4A1;P5CDH (NP_733844), a gene associated with Hyperprolinemia, type II, 239510 (3).
BioGrid reports that CG3752 interacts with CG7338 .
TRiP has 1 RNAi stocks for FBgn0012036 available for purchase.
VDRC has 1 RNAi stocks for FBgn0012036 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	726 ± 39	4 of 4	0.50	Down
Head	2787 ± 102	4 of 4	2.00	Up
Eye	1477 ± 14	4 of 4	1.05	None
Thoracicoabdominal ganglion	905 ± 16	4 of 4	0.60	Down
Salivary gland	2127 ± 76	4 of 4	1.51	Up
Crop	2778 ± 91	4 of 4	2.00	Up
Midgut	1393 ± 27	4 of 4	1.00	None
Tubule	2323 ± 249	4 of 4	1.60	Up
Hindgut	1344 ± 61	4 of 4	1.00	None
Heart	2645 ± 100	4 of 4	1.87	Up
Fat body	3704 ± 452	4 of 4	2.62	Up
Ovary	920 ± 38	4 of 4	0.70	Down
Testis	1464 ± 54	4 of 4	1.00	None
Male accessory glands	858 ± 45	4 of 4	0.60	Down
Virgin spermatheca	3996 ± 150	4 of 4	2.83	Up
Mated spermatheca	3829 ± 169	4 of 4	2.71	Up
Adult carcass	3133 ± 115	4 of 4	2.20	Up
Larval CNS	740 ± 92	4 of 4	0.52	Down
Larval Salivary gland	1432 ± 33	4 of 4	1.01	None
Larval midgut	2034 ± 250	4 of 4	1.44	None
Larval tubule	735 ± 33	4 of 4	0.50	Down
Larval hindgut	892 ± 107	4 of 4	0.63	Down
Larval fat body	835 ± 102	4 of 4	0.60	Down
Larval trachea	1151 ± 103	4 of 4	0.82	Down
Larval carcass	612 ± 76	4 of 4	0.43	Down
S2 cells (growing)	1227 ± 27	4 of 4	0.87	None
Whole fly	1411 ± 82	4 of 4

Looking for CG3752-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720