FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3838-RA through 18771 annotations produced 1 hits

(CG3838):

Annotation Number : CG3838
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032130
Gbrowse : chr2L:9568891-9573572 (+) // 100.0 //
Probeset : 1629868_s_at
Accessions : protein= NP_609298; /// NP_723469;, nucleotide= NM_135454; /// NM_164859;
Interpro : 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical i
FlyMine data for FBgn0032130.
BDGP gene expression has embryonic in situ data for CG3838: 75 pix of staining in 23 body parts.
BioGrid reports that CG3838 interacts with CG5212 CG6946 CG7669 CG8831 .
TRiP has 2 RNAi stocks for FBgn0032130 available for purchase.
VDRC has 2 RNAi stocks for FBgn0032130 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	79 ± 5	4 of 4	1.30	None
Head	56 ± 3	4 of 4	0.90	None
Eye	37 ± 3	4 of 4	0.61	Down
Thoracicoabdominal ganglion	48 ± 0	4 of 4	0.80	Down
Salivary gland	263 ± 8	4 of 4	4.24	Up
Crop	158 ± 10	4 of 4	2.50	Up
Midgut	62 ± 1	4 of 4	1.00	None
Tubule	170 ± 14	4 of 4	2.70	Up
Hindgut	81 ± 3	4 of 4	1.30	Up
Heart	29 ± 3	4 of 4	0.48	Down
Fat body	63 ± 12	4 of 4	1.03	None
Ovary	148 ± 4	4 of 4	2.40	Up
Testis	14 ± 1	4 of 4	0.20	Down
Male accessory glands	208 ± 9	4 of 4	3.40	Up
Virgin spermatheca	99 ± 9	4 of 4	1.61	Up
Mated spermatheca	98 ± 11	4 of 4	1.58	Up
Adult carcass	54 ± 1	4 of 4	0.90	Down
Larval CNS	39 ± 6	4 of 4	0.64	Down
Larval Salivary gland	216 ± 16	4 of 4	3.48	Up
Larval midgut	66 ± 8	4 of 4	1.08	None
Larval tubule	59 ± 2	4 of 4	1.00	None
Larval hindgut	59 ± 3	4 of 4	0.96	None
Larval fat body	17 ± 2	4 of 4	0.30	Down
Larval trachea	60 ± 21	4 of 4	0.98	None
Larval carcass	18 ± 0	4 of 4	0.30	Down
S2 cells (growing)	80 ± 1	4 of 4	1.29	Up
Whole fly	62 ± 1	4 of 4

Looking for CG3838-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720