FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3850-RA through 18771 annotations produced 1 hits

sugarbabe (sug):

Annotation Number : CG3850
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033782
Gbrowse : chr2R:8816367-8818151 (+) // 100.0 //
Probeset : 1624195_at
Accessions : protein= NP_610826;, nucleotide= NM_136982;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annot
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from elect
FlyMine data for FBgn0033782.
BDGP gene expression has embryonic in situ data for CG3850: 34 pix of staining in 4 body parts.
Homophila reports that CG3850 is a close match (9e-13) to human gene BCD1;COPEB;KLF6;ZF9 (NP_001291), a gene associated with Gastric cancer, somatic, 137215 (3);Prostate cancer, somatic, 176807 (3).
BioGrid reports that CG3850 interacts with CG7583 CG4057 CG8495 .
TRiP has 1 RNAi stocks for FBgn0033782 available for purchase.
VDRC has 2 RNAi stocks for FBgn0033782 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	9 ± 2	2 of 4	0.10	Down
Head	197 ± 24	4 of 4	1.40	None
Eye	90 ± 19	4 of 4	0.66	None
Thoracicoabdominal ganglion	9 ± 0	2 of 4	0.10	Down
Salivary gland	9 ± 2	0 of 4	0.07	Down
Crop	8 ± 3	1 of 4	0.10	Down
Midgut	583 ± 29	4 of 4	4.30	Up
Tubule	454 ± 62	4 of 4	3.30	Up
Hindgut	95 ± 14	4 of 4	0.70	None
Heart	485 ± 60	4 of 4	3.54	Up
Fat body	863 ± 99	4 of 4	6.30	Up
Ovary	4 ± 0	0 of 4	0.00	Down
Testis	5 ± 1	0 of 4	0.00	Down
Male accessory glands	7 ± 2	0 of 4	0.10	Down
Virgin spermatheca	650 ± 39	4 of 4	4.74	Up
Mated spermatheca	692 ± 47	4 of 4	5.05	Up
Adult carcass	370 ± 38	4 of 4	2.70	Up
Larval CNS	6 ± 1	1 of 4	0.05	Down
Larval Salivary gland	15 ± 1	4 of 4	0.11	Down
Larval midgut	529 ± 59	4 of 4	3.86	Up
Larval tubule	367 ± 52	4 of 4	2.70	Up
Larval hindgut	117 ± 19	4 of 4	0.86	None
Larval fat body	549 ± 89	4 of 4	4.00	Up
Larval trachea	14 ± 8	3 of 4	0.11	Down
Larval carcass	11 ± 0	1 of 4	0.08	Down
S2 cells (growing)	27 ± 3	4 of 4	0.20	Down
Whole fly	137 ± 13	4 of 4

Looking for CG3850-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720