FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3860-RA through 18771 annotations produced 1 hits

(CG3860):

Annotation Number : CG3860
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034951
Gbrowse : chr2R:19879660-19882573 (-) // 100.0 //
Probeset : 1640415_at
Accessions : protein= NP_611865;, nucleotide= NM_138021;
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008142 // oxysterol binding // inferred from seque
FlyMine data for FBgn0034951.
BDGP gene expression has embryonic in situ data for CG3860: 16 pix of staining in 7 body parts.
BioGrid reports that CG3860 interacts with CG4167 .
VDRC has 1 RNAi stocks for FBgn0034951 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	859 ± 22	4 of 4	3.60	Up
Head	457 ± 19	4 of 4	1.90	Up
Eye	360 ± 13	4 of 4	1.53	Up
Thoracicoabdominal ganglion	687 ± 17	4 of 4	2.90	Up
Salivary gland	420 ± 19	4 of 4	1.78	Up
Crop	192 ± 5	4 of 4	0.80	Down
Midgut	455 ± 7	4 of 4	1.90	Up
Tubule	477 ± 10	4 of 4	2.00	Up
Hindgut	306 ± 2	4 of 4	1.30	Up
Heart	191 ± 10	4 of 4	0.81	Down
Fat body	320 ± 26	4 of 4	1.36	Up
Ovary	292 ± 3	4 of 4	1.20	Up
Testis	275 ± 8	4 of 4	1.20	Up
Male accessory glands	138 ± 5	4 of 4	0.60	Down
Virgin spermatheca	344 ± 13	4 of 4	1.46	Up
Mated spermatheca	291 ± 21	4 of 4	1.23	None
Adult carcass	214 ± 13	4 of 4	0.90	None
Larval CNS	319 ± 24	4 of 4	1.35	Up
Larval Salivary gland	258 ± 6	4 of 4	1.09	Up
Larval midgut	756 ± 19	4 of 4	3.20	Up
Larval tubule	506 ± 14	4 of 4	2.10	Up
Larval hindgut	491 ± 13	4 of 4	2.08	Up
Larval fat body	335 ± 11	4 of 4	1.40	Up
Larval trachea	118 ± 3	4 of 4	0.50	Down
Larval carcass	99 ± 1	4 of 4	0.42	Down
S2 cells (growing)	124 ± 2	4 of 4	0.53	Down
Whole fly	236 ± 6	4 of 4

Looking for CG3860-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720