FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3879-RA through 18771 annotations produced 1 hits

Multi drug resistance 49 (Mdr49):

Annotation Number : CG3879
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004512
Gbrowse : chr2R:8827834-8833849 (-) // 100.0 //
Probeset : 1628659_at
Accessions : protein= NP_001163132; /// NP_523724;, nucleotide= NM_001169661; /// NM_079000;
Pathway : 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electr
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from ph
FlyMine data for FBgn0004512.
BDGP gene expression has embryonic in situ data for Mdr49: 29 pix of staining in 8 body parts.
Homophila reports that CG3879 is a close match (2e-11) to human gene ABCG5 (NP_071881), a gene associated with Sitosterolemia, 210250 (3).
BioGrid reports that CG3879 interacts with CG7752 .
TRiP has 1 RNAi stocks for FBgn0004512 available for purchase.
VDRC has 3 RNAi stocks for FBgn0004512 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	265 ± 9	4 of 4	2.40	Up
Head	112 ± 7	4 of 4	1.00	None
Eye	45 ± 4	4 of 4	0.41	Down
Thoracicoabdominal ganglion	395 ± 13	4 of 4	3.60	Up
Salivary gland	22 ± 4	0 of 4	0.20	Down
Crop	14 ± 3	3 of 4	0.10	Down
Midgut	497 ± 17	4 of 4	4.60	Up
Tubule	1450 ± 66	4 of 4	13.40	Up
Hindgut	350 ± 19	4 of 4	3.20	Up
Heart	61 ± 8	4 of 4	0.57	Down
Fat body	22 ± 14	3 of 4	0.21	Down
Ovary	5 ± 1	0 of 4	0.00	Down
Testis	20 ± 0	4 of 4	0.20	Down
Male accessory glands	1216 ± 38	4 of 4	11.20	Up
Virgin spermatheca	15 ± 1	2 of 4	0.15	Down
Mated spermatheca	19 ± 4	3 of 4	0.18	Down
Adult carcass	194 ± 12	4 of 4	1.80	Up
Larval CNS	40 ± 4	4 of 4	0.37	Down
Larval Salivary gland	12 ± 0	0 of 4	0.11	Down
Larval midgut	432 ± 62	4 of 4	3.98	Up
Larval tubule	1559 ± 177	4 of 4	14.30	Up
Larval hindgut	239 ± 49	4 of 4	2.21	None
Larval fat body	362 ± 63	4 of 4	3.30	Up
Larval trachea	37 ± 24	4 of 4	0.34	Down
Larval carcass	232 ± 88	4 of 4	2.14	None
S2 cells (growing)	15 ± 1	0 of 4	0.14	Down
Whole fly	108 ± 3	4 of 4

Looking for CG3879-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720