FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3886-RA through 18771 annotations produced 1 hits

Posterior sex combs (Psc):

Annotation Number : CG3886
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0005624
Gbrowse : chr2R:8853826-8868494 (-) // 99.8 //
Probeset : 1631095_at
Accessions : protein= NP_523725;, nucleotide= NM_079001;
Pathway : 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0
Interpro : 0003677 // DNA binding // non-traceable author statement /// 0003677 // DNA binding // inferred from electronic annotati
FlyMine data for FBgn0005624.
BioGrid reports that CG3886 interacts with CG6502 CG6502 CG2759 CG2759 CG2759 CG2759 CG7803 CG7803 CG7803 CG7803 CG11387 CG4637 CG2125 CG5942 CG5942 CG12058 CG12058 CG3757 CG5595 CG5595 CG5595 CG5595 .
TRiP has 3 RNAi stocks for FBgn0005624 available for purchase.
VDRC has 2 RNAi stocks for FBgn0005624 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	42 ± 2	4 of 4	1.80	Up
Head	19 ± 1	2 of 4	0.80	None
Eye	30 ± 2	4 of 4	1.26	None
Thoracicoabdominal ganglion	29 ± 1	4 of 4	1.20	None
Salivary gland	31 ± 8	0 of 4	1.30	None
Crop	20 ± 1	2 of 4	0.80	None
Midgut	18 ± 1	0 of 4	0.80	None
Tubule	6 ± 0	0 of 4	0.30	Down
Hindgut	13 ± 1	0 of 4	0.60	None
Heart	12 ± 2	3 of 4	0.52	Down
Fat body	9 ± 7	0 of 4	0.40	Down
Ovary	96 ± 2	4 of 4	4.00	Up
Testis	10 ± 1	0 of 4	0.40	Down
Male accessory glands	32 ± 8	4 of 4	1.40	None
Virgin spermatheca	11 ± 3	0 of 4	0.46	Down
Mated spermatheca	13 ± 3	0 of 4	0.57	None
Adult carcass	25 ± 1	0 of 4	1.00	None
Larval CNS	189 ± 19	4 of 4	7.88	Up
Larval Salivary gland	57 ± 3	4 of 4	2.39	Up
Larval midgut	16 ± 3	0 of 4	0.70	None
Larval tubule	29 ± 4	4 of 4	1.20	None
Larval hindgut	23 ± 1	4 of 4	0.99	None
Larval fat body	14 ± 3	0 of 4	0.60	None
Larval trachea	49 ± 5	4 of 4	2.07	Up
Larval carcass	34 ± 1	4 of 4	1.43	None
S2 cells (growing)	199 ± 2	4 of 4	8.29	Up
Whole fly	24 ± 3	4 of 4

Looking for CG3886-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720