FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3929-RA through 18771 annotations produced 1 hits

deltex (dx):

Annotation Number : CG3929
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000524
Gbrowse : chrX:6428042-6432615 (+) // 100.0 //
Probeset : 1626617_at
Accessions : protein= NP_511064;, nucleotide= NM_078509;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 000573
Interpro : 0005112 // Notch binding // traceable author statement /// 0005112 // Notch binding // inferred from physical interactio
FlyMine data for FBgn0000524.
BDGP gene expression has embryonic in situ data for dx: 4 pix of staining in 1 body parts.
BioGrid reports that CG3929 interacts with CG4216 CG4617 CG4697 CG4755 CG4832 CG4896 CG5009 CG5480 CG5494 CG5709 CG5711 CG6276 CG7109 CG7264 CG7518 CG7524 CG7605 CG7873 CG8247 CG8368 CG9083 CG9331 CG18361 CG5460 CG4264 CG3936 CG3936 CG3936 CG3936 CG3936 CG3936 CG3936 CG3936 CG3936 CG3936 CG3936 CG3936 CG3936 CG3936 CG3936 CG3936 CG2863 CG4244 CG4244 CG4244 CG9854 CG8118 .
TRiP has 2 RNAi stocks for FBgn0000524 available for purchase.
VDRC has 2 RNAi stocks for FBgn0000524 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	43 ± 1	4 of 4	0.20	Down
Head	58 ± 1	4 of 4	0.30	Down
Eye	70 ± 2	4 of 4	0.40	Down
Thoracicoabdominal ganglion	47 ± 1	4 of 4	0.30	Down
Salivary gland	200 ± 11	4 of 4	1.14	None
Crop	98 ± 4	4 of 4	0.60	Down
Midgut	53 ± 4	4 of 4	0.30	Down
Tubule	97 ± 0	4 of 4	0.60	Down
Hindgut	75 ± 2	4 of 4	0.40	Down
Heart	44 ± 2	4 of 4	0.25	Down
Fat body	67 ± 4	4 of 4	0.39	Down
Ovary	571 ± 11	4 of 4	3.30	Up
Testis	17 ± 1	4 of 4	0.10	Down
Male accessory glands	140 ± 2	4 of 4	0.80	Down
Virgin spermatheca	99 ± 4	4 of 4	0.57	Down
Mated spermatheca	98 ± 5	4 of 4	0.56	Down
Adult carcass	57 ± 4	4 of 4	0.30	Down
Larval CNS	175 ± 17	4 of 4	1.00	None
Larval Salivary gland	346 ± 11	4 of 4	1.97	Up
Larval midgut	75 ± 8	4 of 4	0.43	Down
Larval tubule	95 ± 2	4 of 4	0.50	Down
Larval hindgut	111 ± 3	4 of 4	0.63	Down
Larval fat body	97 ± 9	4 of 4	0.60	Down
Larval trachea	152 ± 9	4 of 4	0.87	None
Larval carcass	115 ± 8	4 of 4	0.65	Down
S2 cells (growing)	118 ± 4	4 of 4	0.68	Down
Whole fly	175 ± 7	4 of 4

Looking for CG3929-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720