FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3957-RA through 18771 annotations produced 1 hits

pterodactyl (wmd):

Annotation Number : CG3957
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034876
Gbrowse : chr2R:19432341-19435490 (-) // 100.0 //
Probeset : 1637194_at
Accessions : protein= NP_001097436; /// NP_611804;, nucleotide= NM_001103966; /// NM_137960;
Pathway : 0005875 // microtubule associated complex // inferred from direct assay
Interpro : 0005102 // receptor binding // inferred from sequence or structural similarity
FlyMine data for FBgn0034876.
BDGP gene expression has embryonic in situ data for CG3957: 15 pix of staining in 7 body parts.
Homophila reports that CG3957 is a close match (1e-13) to human gene LIS1;PAFAH1B1 (NP_000421), a gene associated with Lissencephaly-1, 607432 (3);Subcortical laminar heterotopia (3).
VDRC has 1 RNAi stocks for FBgn0034876 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	275 ± 12	4 of 4	1.40	Up
Head	159 ± 7	4 of 4	0.80	Down
Eye	189 ± 9	4 of 4	0.95	None
Thoracicoabdominal ganglion	248 ± 10	4 of 4	1.20	Up
Salivary gland	257 ± 15	4 of 4	1.29	Up
Crop	211 ± 10	4 of 4	1.10	None
Midgut	159 ± 4	4 of 4	0.80	Down
Tubule	405 ± 5	4 of 4	2.00	Up
Hindgut	264 ± 3	4 of 4	1.30	Up
Heart	163 ± 11	4 of 4	0.82	None
Fat body	140 ± 22	4 of 4	0.70	Down
Ovary	358 ± 13	4 of 4	1.80	Up
Testis	313 ± 5	4 of 4	1.60	Up
Male accessory glands	302 ± 13	4 of 4	1.50	Up
Virgin spermatheca	231 ± 9	4 of 4	1.16	None
Mated spermatheca	258 ± 14	4 of 4	1.30	Up
Adult carcass	200 ± 7	4 of 4	1.00	None
Larval CNS	330 ± 15	4 of 4	1.66	Up
Larval Salivary gland	312 ± 14	4 of 4	1.57	Up
Larval midgut	127 ± 3	4 of 4	0.64	Down
Larval tubule	232 ± 7	4 of 4	1.20	None
Larval hindgut	213 ± 9	4 of 4	1.07	None
Larval fat body	179 ± 2	4 of 4	0.90	None
Larval trachea	242 ± 15	4 of 4	1.22	Up
Larval carcass	264 ± 68	4 of 4	1.32	None
S2 cells (growing)	257 ± 2	4 of 4	1.29	Up
Whole fly	199 ± 11	4 of 4

Looking for CG3957-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720