FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3983-RB through 18771 annotations produced 1 hits

Nucleostemin 1 (ns1):

Annotation Number : CG3983
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038473
Gbrowse : chr3R:12896244-12898509 (-) // 100.0 //
Probeset : 1624193_s_at
Accessions : protein= NP_732199;, nucleotide= NM_169742;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annot
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0005525 // GTP binding // inferred from electro
FlyMine data for FBgn0038473.
TRiP has 1 RNAi stocks for FBgn0038473 available for purchase.
VDRC has 2 RNAi stocks for FBgn0038473 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	94 ± 4	4 of 4	0.40	Down
Head	132 ± 6	4 of 4	0.50	Down
Eye	119 ± 4	4 of 4	0.46	Down
Thoracicoabdominal ganglion	123 ± 3	4 of 4	0.50	Down
Salivary gland	209 ± 11	4 of 4	0.81	Down
Crop	188 ± 2	4 of 4	0.70	Down
Midgut	154 ± 8	4 of 4	0.60	Down
Tubule	200 ± 18	4 of 4	0.80	Down
Hindgut	139 ± 9	4 of 4	0.50	Down
Heart	168 ± 7	4 of 4	0.65	Down
Fat body	236 ± 21	4 of 4	0.92	None
Ovary	407 ± 11	4 of 4	1.60	Up
Testis	73 ± 3	4 of 4	0.30	Down
Male accessory glands	439 ± 22	4 of 4	1.70	Up
Virgin spermatheca	255 ± 18	4 of 4	0.99	None
Mated spermatheca	370 ± 8	4 of 4	1.43	Up
Adult carcass	164 ± 4	4 of 4	0.60	Down
Larval CNS	292 ± 8	4 of 4	1.13	Up
Larval Salivary gland	266 ± 26	4 of 4	1.03	None
Larval midgut	122 ± 14	4 of 4	0.48	Down
Larval tubule	76 ± 2	4 of 4	0.30	Down
Larval hindgut	175 ± 17	4 of 4	0.68	Down
Larval fat body	61 ± 2	4 of 4	0.20	Down
Larval trachea	358 ± 67	4 of 4	1.39	None
Larval carcass	241 ± 40	4 of 4	0.93	None
S2 cells (growing)	294 ± 4	4 of 4	1.14	Up
Whole fly	258 ± 8	4 of 4

Looking for CG3983-RB. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720