FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3995-RA through 18771 annotations produced 1 hits

(CG3995):

Annotation Number : CG3995
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038472
Gbrowse : chr3R:12867616-12868826 (-) // 100.0 //
Probeset : 1628096_at
Accessions : protein= NP_650591;, nucleotide= NM_142334;
Interpro : 0003677 // DNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical i
FlyMine data for FBgn0038472.
BioGrid reports that CG3995 interacts with CG3995 CG5711 CG7386 CG8092 CG5140 CG6569 CG7111 .
TRiP has 1 RNAi stocks for FBgn0038472 available for purchase.
VDRC has 2 RNAi stocks for FBgn0038472 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	78 ± 3	4 of 4	1.20	Up
Head	42 ± 2	4 of 4	0.70	Down
Eye	39 ± 2	4 of 4	0.60	Down
Thoracicoabdominal ganglion	74 ± 3	4 of 4	1.10	None
Salivary gland	50 ± 5	0 of 4	0.76	None
Crop	76 ± 3	4 of 4	1.20	None
Midgut	43 ± 0	4 of 4	0.70	Down
Tubule	34 ± 2	4 of 4	0.50	Down
Hindgut	35 ± 2	4 of 4	0.50	Down
Heart	29 ± 2	4 of 4	0.45	Down
Fat body	48 ± 5	4 of 4	0.73	Down
Ovary	202 ± 5	4 of 4	3.10	Up
Testis	31 ± 2	4 of 4	0.50	Down
Male accessory glands	82 ± 7	4 of 4	1.30	None
Virgin spermatheca	66 ± 5	4 of 4	1.02	None
Mated spermatheca	92 ± 7	4 of 4	1.40	Up
Adult carcass	40 ± 2	3 of 4	0.60	Down
Larval CNS	135 ± 4	4 of 4	2.07	Up
Larval Salivary gland	57 ± 2	4 of 4	0.88	None
Larval midgut	34 ± 2	4 of 4	0.53	Down
Larval tubule	31 ± 3	4 of 4	0.50	Down
Larval hindgut	38 ± 3	4 of 4	0.58	Down
Larval fat body	35 ± 4	4 of 4	0.50	Down
Larval trachea	86 ± 7	4 of 4	1.31	Up
Larval carcass	41 ± 2	4 of 4	0.63	Down
S2 cells (growing)	68 ± 1	4 of 4	1.05	None
Whole fly	65 ± 2	4 of 4

Looking for CG3995-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720