FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG3999-RA through 18771 annotations produced 1 hits

/// (CG3999 /// DsecCG3999):

Annotation Number : CG3999
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037801
Gbrowse : chr3R:6077239-6081002 (+) // 100.0 //
Probeset : 1624695_at
Accessions : protein= NP_649989;, nucleotide= NM_141732;
Pathway : 0005960 // glycine cleavage complex // inferred from sequence or structural similarity
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004375 // glycine dehydrogenase (decarboxylati
FlyMine data for FBgn0037801.
BDGP gene expression has embryonic in situ data for CG3999: 34 pix of staining in 4 body parts.
Homophila reports that CG3999 is a close match (0) to human gene GCE;GCSP;GLDC;HYGN1;NKH (NP_000161), a gene associated with Glycine encephalopathy, 605899 (3).
VDRC has 3 RNAi stocks for FBgn0037801 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	11 ± 1	3 of 4	0.40	Down
Head	88 ± 2	4 of 4	3.30	Up
Eye	22 ± 5	3 of 4	0.83	None
Thoracicoabdominal ganglion	8 ± 1	1 of 4	0.30	Down
Salivary gland	4 ± 2	0 of 4	0.17	Down
Crop	7 ± 1	0 of 4	0.30	Down
Midgut	5 ± 0	0 of 4	0.20	Down
Tubule	17 ± 3	3 of 4	0.70	Down
Hindgut	13 ± 1	2 of 4	0.50	Down
Heart	56 ± 2	4 of 4	2.10	Up
Fat body	313 ± 66	4 of 4	11.66	Up
Ovary	2 ± 0	0 of 4	0.10	Down
Testis	5 ± 0	0 of 4	0.20	Down
Male accessory glands	1 ± 0	0 of 4	0.10	Down
Virgin spermatheca	242 ± 7	4 of 4	9.01	Up
Mated spermatheca	138 ± 32	4 of 4	5.16	Up
Adult carcass	119 ± 3	4 of 4	4.40	Up
Larval CNS	5 ± 1	0 of 4	0.21	Down
Larval Salivary gland	32 ± 5	4 of 4	1.22	None
Larval midgut	5 ± 1	0 of 4	0.20	Down
Larval tubule	15 ± 1	3 of 4	0.60	Down
Larval hindgut	41 ± 10	4 of 4	1.54	None
Larval fat body	2208 ± 176	4 of 4	82.10	Up
Larval trachea	9 ± 10	1 of 4	0.36	Down
Larval carcass	11 ± 1	2 of 4	0.43	Down
S2 cells (growing)	6 ± 1	2 of 4	0.25	Down
Whole fly	26 ± 3	4 of 4

Looking for CG3999-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720