FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4003-RA through 18771 annotations produced 1 hits

dpontin (pont):

Annotation Number : CG4003
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040078
Gbrowse : chr3R:6087833-6089623 (+) // 100.0 //
Probeset : 1635279_at
Accessions : protein= NP_652608;, nucleotide= NM_144351;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005875 // microtubule associated complex // inferred from
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003678 // DNA helicase activity // inferred fr
FlyMine data for FBgn0040078.
BDGP gene expression has embryonic in situ data for pont: 19 pix of staining in 19 body parts.
BioGrid reports that CG4003 interacts with CG9750 CG7952 CG9925 CG11579 .
VDRC has 1 RNAi stocks for FBgn0040078 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	79 ± 4	4 of 4	0.30	Down
Head	77 ± 1	4 of 4	0.30	Down
Eye	76 ± 3	4 of 4	0.34	Down
Thoracicoabdominal ganglion	78 ± 5	4 of 4	0.30	Down
Salivary gland	93 ± 8	4 of 4	0.41	Down
Crop	107 ± 7	4 of 4	0.50	Down
Midgut	102 ± 6	4 of 4	0.50	Down
Tubule	108 ± 8	4 of 4	0.50	Down
Hindgut	87 ± 2	4 of 4	0.40	Down
Heart	72 ± 5	4 of 4	0.32	Down
Fat body	82 ± 8	4 of 4	0.36	Down
Ovary	380 ± 6	4 of 4	1.70	Up
Testis	477 ± 1	4 of 4	2.10	Up
Male accessory glands	186 ± 5	4 of 4	0.80	Down
Virgin spermatheca	81 ± 0	4 of 4	0.36	Down
Mated spermatheca	94 ± 6	4 of 4	0.42	Down
Adult carcass	68 ± 3	4 of 4	0.30	Down
Larval CNS	449 ± 13	4 of 4	1.97	Up
Larval Salivary gland	252 ± 7	4 of 4	1.11	Up
Larval midgut	88 ± 6	4 of 4	0.39	Down
Larval tubule	153 ± 4	4 of 4	0.70	Down
Larval hindgut	133 ± 9	4 of 4	0.59	Down
Larval fat body	165 ± 32	4 of 4	0.70	None
Larval trachea	275 ± 51	4 of 4	1.21	None
Larval carcass	156 ± 10	4 of 4	0.69	Down
S2 cells (growing)	241 ± 5	4 of 4	1.06	None
Whole fly	227 ± 4	4 of 4

Looking for CG4003-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720