FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4004-RA through 18771 annotations produced 2 hits

(CG4004):

Annotation Number : CG4004
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030418
Gbrowse : chrX:12639390-12641787 (+) // 99.5 //
Probeset : 1638751_a_at
Accessions : protein= NP_572824; /// NP_727638;, nucleotide= NM_132596; /// NM_167336;
FlyMine data for FBgn0030418.
BDGP gene expression has embryonic in situ data for CG4004: 8 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0030418 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	68 ± 2	4 of 4	2.50	Up
Head	30 ± 2	4 of 4	1.10	None
Eye	40 ± 5	4 of 4	1.45	None
Thoracicoabdominal ganglion	46 ± 4	4 of 4	1.70	Up
Salivary gland	86 ± 4	4 of 4	3.14	Up
Crop	42 ± 3	4 of 4	1.50	None
Midgut	35 ± 4	4 of 4	1.30	None
Tubule	83 ± 13	4 of 4	3.00	Up
Hindgut	36 ± 3	4 of 4	1.30	None
Heart	28 ± 2	4 of 4	1.03	None
Fat body	34 ± 4	4 of 4	1.25	None
Ovary	39 ± 3	4 of 4	1.40	None
Testis	11 ± 2	2 of 4	0.40	None
Male accessory glands	27 ± 3	4 of 4	1.00	None
Virgin spermatheca	66 ± 2	4 of 4	2.41	Up
Mated spermatheca	69 ± 6	4 of 4	2.51	Up
Adult carcass	27 ± 4	4 of 4	1.00	None
Larval CNS	112 ± 14	4 of 4	4.07	Up
Larval Salivary gland	79 ± 3	4 of 4	2.86	Up
Larval midgut	40 ± 4	4 of 4	1.46	None
Larval tubule	59 ± 1	4 of 4	2.20	Up
Larval hindgut	50 ± 8	4 of 4	1.83	None
Larval fat body	40 ± 3	4 of 4	1.40	None
Larval trachea	66 ± 13	4 of 4	2.40	Up
Larval carcass	51 ± 10	4 of 4	1.85	None
S2 cells (growing)	63 ± 2	4 of 4	2.30	Up
Whole fly	27 ± 5	4 of 4

(CG4004):

Annotation Number : CG4004
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030418
Gbrowse : chrX:12638498-12643818 (+) // 100.0 //
Probeset : 1637651_at
Accessions : protein= NP_572824; /// NP_727638;, nucleotide= NM_132596; /// NM_167336;
FlyMine data for FBgn0030418.
BDGP gene expression has embryonic in situ data for CG4004: 8 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0030418 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	20 ± 3	3 of 4	7.90	Up
Head	3 ± 1	0 of 4	1.50	None
Eye	3 ± 1	1 of 4	1.17	None
Thoracicoabdominal ganglion	16 ± 1	1 of 4	6.20	Up
Salivary gland	7 ± 2	0 of 4	2.77	None
Crop	5 ± 1	0 of 4	2.20	None
Midgut	1 ± 0	0 of 4	0.70	None
Tubule	7 ± 0	0 of 4	2.90	Up
Hindgut	5 ± 1	0 of 4	2.10	None
Heart	2 ± 0	0 of 4	0.96	None
Fat body	7 ± 2	0 of 4	2.81	Up
Ovary	1 ± 1	0 of 4	0.70	None
Testis	1 ± 0	0 of 4	0.70	None
Male accessory glands	1 ± 0	0 of 4	0.70	None
Virgin spermatheca	4 ± 2	0 of 4	1.75	None
Mated spermatheca	4 ± 1	0 of 4	1.62	None
Adult carcass	6 ± 2	0 of 4	2.40	None
Larval CNS	16 ± 3	3 of 4	6.33	Up
Larval Salivary gland	11 ± 2	0 of 4	4.40	Up
Larval midgut	4 ± 1	0 of 4	1.79	None
Larval tubule	5 ± 2	0 of 4	2.10	None
Larval hindgut	6 ± 1	1 of 4	2.48	None
Larval fat body	7 ± 2	0 of 4	2.70	None
Larval trachea	2 ± 1	0 of 4	0.76	None
Larval carcass	8 ± 1	0 of 4	3.36	Up
S2 cells (growing)	8 ± 1	0 of 4	3.42	Up
Whole fly	2 ± 1	0 of 4

Looking for CG4004-RA. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720