FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4041-RA through 18771 annotations produced 1 hits

(CG4041):

Annotation Number : CG4041
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029736
Gbrowse : chrX:4809450-4812478 (-) // 100.0 //
Probeset : 1629746_at
Accessions : protein= NP_572197;, nucleotide= NM_131969;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0004672 // protein kinase activity // inferred from electronic annotation /// 0004672 // protein kinase activity // non-
FlyMine data for FBgn0029736.
BDGP gene expression has embryonic in situ data for CG4041: 19 pix of staining in 15 body parts.
TRiP has 1 RNAi stocks for FBgn0029736 available for purchase.
VDRC has 2 RNAi stocks for FBgn0029736 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	26 ± 1	4 of 4	1.10	None
Head	19 ± 2	3 of 4	0.80	None
Eye	23 ± 3	4 of 4	0.95	None
Thoracicoabdominal ganglion	33 ± 6	4 of 4	1.30	None
Salivary gland	75 ± 4	4 of 4	2.98	Up
Crop	29 ± 2	4 of 4	1.20	None
Midgut	29 ± 4	2 of 4	1.20	None
Tubule	26 ± 1	3 of 4	1.00	None
Hindgut	36 ± 2	4 of 4	1.50	Up
Heart	46 ± 2	4 of 4	1.85	Up
Fat body	51 ± 8	4 of 4	2.04	Up
Ovary	34 ± 2	4 of 4	1.40	None
Testis	10 ± 2	1 of 4	0.40	Down
Male accessory glands	46 ± 2	4 of 4	1.90	Up
Virgin spermatheca	42 ± 2	4 of 4	1.67	Up
Mated spermatheca	40 ± 2	4 of 4	1.61	Up
Adult carcass	42 ± 4	4 of 4	1.70	Up
Larval CNS	64 ± 3	4 of 4	2.55	Up
Larval Salivary gland	94 ± 5	4 of 4	3.76	Up
Larval midgut	30 ± 3	4 of 4	1.19	None
Larval tubule	28 ± 1	4 of 4	1.10	None
Larval hindgut	56 ± 1	4 of 4	2.23	Up
Larval fat body	40 ± 3	4 of 4	1.60	Up
Larval trachea	59 ± 6	4 of 4	2.38	Up
Larval carcass	58 ± 7	4 of 4	2.31	Up
S2 cells (growing)	120 ± 6	4 of 4	4.77	Up
Whole fly	25 ± 3	4 of 4

Looking for CG4041-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720