FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4078-RA through 18771 annotations produced 1 hits

(CG4078):

Annotation Number : CG4078
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0029798
Gbrowse : chrX:5641781-5645815 (+) // 100.0 //
Probeset : 1636909_at
Accessions : protein= NP_572254;, nucleotide= NM_132026;
Pathway : nucleoside
Interpro : nucleotide and nucleic acid metabolic process // inferred from electronic annotation /// 0006281 // DNA repair // infer
FlyMine data for FBgn0029798.
BDGP gene expression has embryonic in situ data for CG4078: 13 pix of staining in 16 body parts.
Homophila reports that CG4078 is a close match (2e-36) to human gene COFS2;EM9;ERCC2;XPD (NP_000391), a gene associated with Cerebrooculofacioskeletal syndrome 2, 610756 (3);Trichothiodystrophy, 601675 (3);Xeroderma pigmentosum, group D, 278730 (3).
BioGrid reports that CG4078 interacts with CG10616 CG13030 CG2189 .
TRiP has 1 RNAi stocks for FBgn0029798 available for purchase.
VDRC has 3 RNAi stocks for FBgn0029798 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	41 ± 2	4 of 4	0.60	Down
Head	31 ± 2	4 of 4	0.50	Down
Eye	14 ± 3	2 of 4	0.21	Down
Thoracicoabdominal ganglion	39 ± 1	4 of 4	0.60	Down
Salivary gland	43 ± 5	3 of 4	0.65	Down
Crop	34 ± 1	4 of 4	0.50	Down
Midgut	34 ± 1	4 of 4	0.50	Down
Tubule	35 ± 3	4 of 4	0.50	Down
Hindgut	27 ± 1	4 of 4	0.40	Down
Heart	20 ± 1	4 of 4	0.30	Down
Fat body	44 ± 4	4 of 4	0.66	Down
Ovary	138 ± 6	4 of 4	2.10	Up
Testis	18 ± 1	4 of 4	0.30	Down
Male accessory glands	26 ± 2	4 of 4	0.40	Down
Virgin spermatheca	47 ± 2	4 of 4	0.71	Down
Mated spermatheca	48 ± 2	4 of 4	0.73	Down
Adult carcass	33 ± 1	4 of 4	0.50	Down
Larval CNS	55 ± 1	4 of 4	0.83	None
Larval Salivary gland	50 ± 4	4 of 4	0.75	None
Larval midgut	34 ± 1	4 of 4	0.51	Down
Larval tubule	27 ± 1	2 of 4	0.40	Down
Larval hindgut	33 ± 2	4 of 4	0.49	Down
Larval fat body	38 ± 5	4 of 4	0.60	Down
Larval trachea	40 ± 5	4 of 4	0.61	Down
Larval carcass	51 ± 4	4 of 4	0.77	None
S2 cells (growing)	43 ± 1	4 of 4	0.64	Down
Whole fly	67 ± 5	4 of 4

Looking for CG4078-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720