FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4088-RA through 18771 annotations produced 1 hits

/// Origin recognition complex subunit 3 (CG34315 /// lat):

Annotation Number : CG4088
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0005654 /// FBgn0085344
Gbrowse : chr2R:9090230-9094027 (-) // 100.0 //
Probeset : 1627828_s_at
Accessions : protein= NP_001097298; /// NP_476904;, nucleotide= NM_001103828; /// NM_057556;
Pathway : 0005664 // nuclear origin of replication recognition complex // inferred from direct assay /// 0005664 // nuclear origin
Interpro : 0003677 // DNA binding // inferred from electronic annotation /// 0003677 // DNA binding // non-traceable author stateme
FlyMine data for FBgn0005654 /// FBgn0085344.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	9 ± 1	4 of 4	0.10	Down
Head	9 ± 0	0 of 4	0.10	Down
Eye	8 ± 0	2 of 4	0.10	Down
Thoracicoabdominal ganglion	9 ± 2	2 of 4	0.10	Down
Salivary gland	9 ± 3	0 of 4	0.11	Down
Crop	11 ± 2	1 of 4	0.10	Down
Midgut	15 ± 0	1 of 4	0.20	Down
Tubule	6 ± 1	0 of 4	0.10	Down
Hindgut	5 ± 0	0 of 4	0.10	Down
Heart	3 ± 1	1 of 4	0.04	Down
Fat body	3 ± 3	0 of 4	0.04	Down
Ovary	198 ± 7	4 of 4	2.30	Up
Testis	434 ± 5	4 of 4	4.90	Up
Male accessory glands	12 ± 3	0 of 4	0.10	Down
Virgin spermatheca	4 ± 1	0 of 4	0.05	Down
Mated spermatheca	4 ± 1	0 of 4	0.05	Down
Adult carcass	8 ± 0	0 of 4	0.10	Down
Larval CNS	74 ± 6	4 of 4	0.84	None
Larval Salivary gland	14 ± 2	3 of 4	0.16	Down
Larval midgut	6 ± 1	0 of 4	0.08	Down
Larval tubule	11 ± 1	2 of 4	0.10	Down
Larval hindgut	11 ± 2	0 of 4	0.13	Down
Larval fat body	64 ± 38	3 of 4	0.70	None
Larval trachea	19 ± 2	4 of 4	0.22	Down
Larval carcass	19 ± 1	4 of 4	0.22	Down
S2 cells (growing)	48 ± 3	4 of 4	0.55	Down
Whole fly	87 ± 4	4 of 4

Looking for CG4088-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720