FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4099-RA through 18771 annotations produced 1 hits

Scavenger Receptor (Sr-CI):

Annotation Number : CG4099
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014033
Gbrowse : chr2L:4121720-4124002 (+) // 100.0 //
Probeset : 1631821_at
Accessions : protein= NP_477102;, nucleotide= NM_057754;
Pathway : 0005887 // integral to plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electr
Interpro : 0004872 // receptor activity // inferred from electronic annotation /// 0005044 // scavenger receptor activity // inferr
FlyMine data for FBgn0014033.
BioGrid reports that CG4099 interacts with CG8340 CG6688 .
VDRC has 3 RNAi stocks for FBgn0014033 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	51 ± 3	4 of 4	1.40	Up
Head	165 ± 9	4 of 4	4.60	Up
Eye	29 ± 3	4 of 4	0.82	None
Thoracicoabdominal ganglion	23 ± 2	4 of 4	0.70	None
Salivary gland	18 ± 3	1 of 4	0.53	Down
Crop	7 ± 2	2 of 4	0.20	Down
Midgut	2 ± 0	0 of 4	0.10	Down
Tubule	3 ± 0	0 of 4	0.10	Down
Hindgut	3 ± 0	0 of 4	0.10	Down
Heart	550 ± 27	4 of 4	15.48	Up
Fat body	33 ± 9	4 of 4	0.94	None
Ovary	3 ± 1	0 of 4	0.10	Down
Testis	10 ± 1	3 of 4	0.30	Down
Male accessory glands	4 ± 2	0 of 4	0.10	Down
Virgin spermatheca	12 ± 1	4 of 4	0.35	Down
Mated spermatheca	11 ± 0	2 of 4	0.32	Down
Adult carcass	172 ± 9	4 of 4	4.90	Up
Larval CNS	2 ± 2	0 of 4	0.08	Down
Larval Salivary gland	4 ± 2	0 of 4	0.13	Down
Larval midgut	7 ± 1	1 of 4	0.20	Down
Larval tubule	8 ± 2	2 of 4	0.20	Down
Larval hindgut	20 ± 3	4 of 4	0.57	Down
Larval fat body	12 ± 3	2 of 4	0.40	Down
Larval trachea	67 ± 10	4 of 4	1.91	Up
Larval carcass	119 ± 4	4 of 4	3.36	Up
S2 cells (growing)	28 ± 1	4 of 4	0.80	None
Whole fly	35 ± 4	4 of 4

Looking for CG4099-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720