FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4145-RC through 18771 annotations produced 1 hits

"type IV collagen ( alpha-chain"):

Annotation Number : CG4145
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : chr2L:5030136-5037114 (+) // 99.62 //
Probeset : 1630150_s_at
Accessions : protein= , nucleotide= NP_723044; /// NP_723045; /// NP_723046;
Pathway : 0007391 // dorsal closure // traceable author statement
Interpro : 0005576 // extracellular region // inferred from electronic annotation /// 0005578 // proteinaceous extracellular matrix
FlyMine data for full length.
Homophila reports that CG4145 is a close match (4e-11) to human gene COL11A2;DFNA13;STL3 (NP_542410), a gene associated with Deafness, autosomal dominant 13, 601868 (3);Otospondylomegaepiphyseal dysplasia, 215150 (3);Stickler syndrome, type III, 184840 (3);Weissenbacher-Zweymuller syndrome, 277610 (3).
BioGrid reports that CG4145 interacts with CG2189 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	369 ± 29	4 of 4	1.60	Up
Head	338 ± 20	4 of 4	1.50	Up
Eye	103 ± 14	4 of 4	0.46	Down
Thoracicoabdominal ganglion	710 ± 55	4 of 4	3.10	Up
Salivary gland	15 ± 3	0 of 4	0.07	Down
Crop	49 ± 8	4 of 4	0.20	Down
Midgut	20 ± 0	0 of 4	0.10	Down
Tubule	29 ± 7	2 of 4	0.10	Down
Hindgut	64 ± 7	4 of 4	0.30	Down
Heart	1899 ± 64	4 of 4	8.40	Up
Fat body	1374 ± 171	4 of 4	6.08	Up
Ovary	155 ± 8	4 of 4	0.70	None
Testis	44 ± 2	4 of 4	0.20	Down
Male accessory glands	39 ± 5	4 of 4	0.20	Down
Virgin spermatheca	658 ± 66	4 of 4	2.91	Up
Mated spermatheca	1035 ± 70	4 of 4	4.58	Up
Adult carcass	606 ± 21	4 of 4	2.70	Up
Larval CNS	280 ± 46	4 of 4	1.24	None
Larval Salivary gland	126 ± 16	4 of 4	0.56	Down
Larval midgut	41 ± 4	4 of 4	0.18	Down
Larval tubule	55 ± 7	4 of 4	0.20	Down
Larval hindgut	268 ± 37	4 of 4	1.19	None
Larval fat body	519 ± 40	4 of 4	2.30	Up
Larval trachea	229 ± 6	4 of 4	1.01	None
Larval carcass	326 ± 24	4 of 4	1.44	Up
S2 cells (growing)	2692 ± 57	4 of 4	11.90	Up
Whole fly	226 ± 27	4 of 4

Looking for CG4145-RC. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720