FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG4170-RD through 18771 annotations produced 1 hits

vasa intronic gene (vig):

Annotation Number : CG4170
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024183
Gbrowse : chr2L:15064197-15070316 (-) // 100.0 //
Probeset : 1626246_s_at
Accessions : protein= NP_523572; /// NP_723896; /// NP_723897; /// NP_723898;, nucleotide= NM_078848; /// NM_165100; /// NM_165101; /// NM_165102;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005700 // polytene chromosome // inferred from direct assay /// 00
Interpro : 0003729 // mRNA binding // inferred from sequence or structural similarity
FlyMine data for FBgn0024183.
BDGP gene expression has embryonic in situ data for vig: 33 pix of staining in 20 body parts.
BioGrid reports that CG4170 interacts with CG7439 CG7439 .
TRiP has 2 RNAi stocks for FBgn0024183 available for purchase.
VDRC has 3 RNAi stocks for FBgn0024183 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	539 ± 27	4 of 4	2.60	Up
Head	246 ± 38	4 of 4	1.20	None
Eye	279 ± 30	4 of 4	1.37	None
Thoracicoabdominal ganglion	360 ± 46	4 of 4	1.80	Up
Salivary gland	56 ± 6	2 of 4	0.28	Down
Crop	287 ± 12	4 of 4	1.40	Up
Midgut	94 ± 8	3 of 4	0.50	Down
Tubule	482 ± 27	4 of 4	2.40	Up
Hindgut	287 ± 9	4 of 4	1.40	Up
Heart	353 ± 36	4 of 4	1.73	Up
Fat body	209 ± 29	4 of 4	1.03	None
Ovary	126 ± 3	4 of 4	0.60	Down
Testis	770 ± 11	4 of 4	3.80	Up
Male accessory glands	66 ± 3	2 of 4	0.30	Down
Virgin spermatheca	168 ± 7	3 of 4	0.83	Down
Mated spermatheca	311 ± 18	4 of 4	1.53	Up
Adult carcass	222 ± 22	4 of 4	1.10	None
Larval CNS	327 ± 20	4 of 4	1.61	Up
Larval Salivary gland	96 ± 11	4 of 4	0.48	Down
Larval midgut	65 ± 4	0 of 4	0.32	Down
Larval tubule	140 ± 7	4 of 4	0.70	Down
Larval hindgut	228 ± 21	4 of 4	1.12	None
Larval fat body	144 ± 12	4 of 4	0.70	Down
Larval trachea	222 ± 41	4 of 4	1.09	None
Larval carcass	207 ± 36	4 of 4	1.02	None
S2 cells (growing)	417 ± 12	4 of 4	2.05	Up
Whole fly	203 ± 10	4 of 4

Looking for CG4170-RD. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720